RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 SCNN1DP51172 638 aa21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 FMR1Q06787 632 aaKnown RBP eCLIP21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 DDX46Q7L014 1031 aaKnown RBP21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 RTFDC1Q9BY42 306 aaPredicted RBP21.77■■□□□ 1.08
CROCCP3-203ENST00000589964 EPHX2P34913 555 aa21.76■■□□□ 1.07
CROCCP3-203ENST00000589964 EPS15P42566 896 aa21.76■■□□□ 1.07
CROCCP3-203ENST00000589964 SF3B3Q15393 1217 aaKnown RBP21.76■■□□□ 1.07
CROCCP3-203ENST00000589964 HACL1Q9UJ83 578 aa21.76■■□□□ 1.07
CROCCP3-203ENST00000589964 MAP3K2Q9Y2U5 619 aa21.76■■□□□ 1.07
CROCCP3-203ENST00000589964 SHTN1A0MZ66 631 aa21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 BBOX1O75936 387 aa21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 CCDC30Q5VVM6 783 aa21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 GPC2Q8N158 579 aa21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 JDP2Q8WYK2 163 aa21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 METTL22Q9BUU2 404 aaPredicted RBP21.75■■□□□ 1.07
CROCCP3-203ENST00000589964 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 ITGBL1O95965 494 aaPredicted RBP21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 GPSM2P81274 684 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 MAP1SQ66K74 1059 aaPredicted RBP21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 NIM1KQ8IY84 436 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 MPNDQ8N594 471 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 ZBTB38Q8NAP3 1195 aaPredicted RBP21.74■■□□□ 1.07
CROCCP3-203ENST00000589964 IQCA1LA6NCM1 817 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 CXCL9Q07325 125 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 CWF19L2Q2TBE0 894 aaKnown RBP21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 LDHDQ86WU2 507 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 FAM9BQ8IZU0 186 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 IL16Q14005 1332 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
CROCCP3-203ENST00000589964 PCNTO95613 3336 aa21.72■■□□□ 1.07
CROCCP3-203ENST00000589964 WTIPA6NIX2 430 aaPredicted RBP21.72■■□□□ 1.07
CROCCP3-203ENST00000589964 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
CROCCP3-203ENST00000589964 JMYQ8N9B5 988 aa21.72■■□□□ 1.07
CROCCP3-203ENST00000589964 POLLQ9UGP5 575 aa21.72■■□□□ 1.07
CROCCP3-203ENST00000589964 RAD17O75943 681 aa21.71■■□□□ 1.07
CROCCP3-203ENST00000589964 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
CROCCP3-203ENST00000589964 KIAA2012Q0VF49 1180 aa21.71■■□□□ 1.07
CROCCP3-203ENST00000589964 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
CROCCP3-203ENST00000589964 PCCAP05165 728 aaPredicted RBP21.7■■□□□ 1.06
CROCCP3-203ENST00000589964 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
CROCCP3-203ENST00000589964 CCDC191Q8NCU4 936 aa21.7■■□□□ 1.06
CROCCP3-203ENST00000589964 CWC25Q9NXE8 425 aaPredicted RBP21.7■■□□□ 1.06
CROCCP3-203ENST00000589964 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
CROCCP3-203ENST00000589964 GMPSP49915 693 aaPredicted RBP21.69■■□□□ 1.06
CROCCP3-203ENST00000589964 MKRN1Q9UHC7 482 aaKnown RBP21.69■■□□□ 1.06
CROCCP3-203ENST00000589964 ZNRF3Q9ULT6 936 aa21.69■■□□□ 1.06
CROCCP3-203ENST00000589964 CLEC11AQ9Y240 323 aa21.69■■□□□ 1.06
CROCCP3-203ENST00000589964 VAMP4O75379 141 aa21.68■■□□□ 1.06
CROCCP3-203ENST00000589964 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
CROCCP3-203ENST00000589964 NEURL1BA8MQ27 555 aa21.67■■□□□ 1.06
CROCCP3-203ENST00000589964 RIMBP2O15034 1052 aa21.67■■□□□ 1.06
CROCCP3-203ENST00000589964 DBNDD1Q9H9R9 158 aa21.67■■□□□ 1.06
CROCCP3-203ENST00000589964 NSFL1CQ9UNZ2 370 aaKnown RBP21.67■■□□□ 1.06
CROCCP3-203ENST00000589964 TRAF5O00463 557 aa21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 RPS8P62241 208 aaKnown RBP21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 FLIIQ13045 1269 aa21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 DOK7Q18PE1 504 aa21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 GPRC5DQ9NZD1 345 aa21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 ZBTB12Q9Y330 459 aaPredicted RBP21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 SCN9AQ15858 1988 aa21.66■■□□□ 1.06
CROCCP3-203ENST00000589964 RTL9Q8NET4 1388 aa21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 DDX58O95786 925 aaKnown RBP21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 WDR63Q8IWG1 891 aa21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 CNTROBQ8N137 903 aa21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 TRPM4Q8TD43 1214 aa21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
CROCCP3-203ENST00000589964 SPEF2Q9C093 1822 aa21.64■■□□□ 1.06
CROCCP3-203ENST00000589964 F6X3S4 739 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 PDE8AO60658 829 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 HIRAP54198 1017 aaPredicted RBP21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 CTSWP56202 376 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 UBE3BQ7Z3V4 1068 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 TBC1D16Q8TBP0 767 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 CREBZFQ9NS37 354 aa21.64■■□□□ 1.05
CROCCP3-203ENST00000589964 ZNF521Q96K83 1311 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 CDHR2Q9BYE9 1310 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 EGFRP00533 1210 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 CASP7P55210 303 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 CIAPIN1Q6FI81 312 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 GREM2Q9H772 168 aa21.63■■□□□ 1.05
CROCCP3-203ENST00000589964 TTLL11Q8NHH1 800 aa21.62■■□□□ 1.05
CROCCP3-203ENST00000589964 H7C1W4 665 aa21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 PSMD14O00487 310 aa21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 LMOD1P29536 600 aaPredicted RBP21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 WASHC4Q2M389 1173 aa21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 TMC4Q7Z404 712 aa21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 VPS33BQ9H267 617 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms