RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 RUFY3Q7L099 469 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 TOP1P11387 765 aaKnown RBP14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 EPS15P42566 896 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 WASF1Q92558 559 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 DBNDD2Q9BQY9 259 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
PRKAR1A-217ENST00000589228 METAP2P50579 478 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRKAR1A-217ENST00000589228 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.16
PRKAR1A-217ENST00000589228 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
PRKAR1A-217ENST00000589228 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.16
PRKAR1A-217ENST00000589228 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.16
PRKAR1A-217ENST00000589228 RXRAP19793 462 aa14.02□□□□□ -0.17
PRKAR1A-217ENST00000589228 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
PRKAR1A-217ENST00000589228 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.17
PRKAR1A-217ENST00000589228 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.17
PRKAR1A-217ENST00000589228 ATP2B3Q16720 1220 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 TCEAL9Q9UHQ7 104 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 RUFY1Q96T51 708 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 TTC37Q6PGP7 1564 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 PIP4K2BP78356 416 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 ARHGAP29Q52LW3 1261 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 ERICH4A6NGS2 130 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 SLC5A1P13866 664 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 PTGS1P23219 599 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 IL15P40933 162 aaPredicted RBP14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 UNC5CLQ8IV45 518 aa14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZNHIT6Q9NWK9 470 aaKnown RBP14.01□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZNF790Q6PG37 636 aa14□□□□□ -0.17
PRKAR1A-217ENST00000589228 KRT18P05783 430 aaKnown RBP14□□□□□ -0.17
PRKAR1A-217ENST00000589228 SSRP1Q08945 709 aaKnown RBP14□□□□□ -0.17
PRKAR1A-217ENST00000589228 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
PRKAR1A-217ENST00000589228 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
PRKAR1A-217ENST00000589228 SOGA3Q5TF21 947 aa14□□□□□ -0.17
PRKAR1A-217ENST00000589228 NOL12Q9UGY1 213 aaKnown RBP eCLIP14□□□□□ -0.17
PRKAR1A-217ENST00000589228 V9GYY5 206 aaPredicted RBP14□□□□□ -0.17
PRKAR1A-217ENST00000589228 KDM5AP29375 1690 aaKnown RBP14□□□□□ -0.17
PRKAR1A-217ENST00000589228 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 EXOC5O00471 708 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 USP5P45974 858 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 AOPEPQ8N6M6 819 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 RAD50Q92878 1312 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 EPB41L2O43491 1005 aaKnown RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 SKILP12757 684 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 LMOD1P29536 600 aaPredicted RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 STIM1Q13586 685 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 CCDC43Q96MW1 224 aaKnown RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 ALG1Q9BT22 464 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 METP08581 1390 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 PRC1O43663 620 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 IQCA1Q86XH1 822 aa13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
PRKAR1A-217ENST00000589228 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 ACBD3Q9H3P7 528 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 DEF6Q9H4E7 631 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 SLC27A2O14975 620 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 SYKP43405 635 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 HSPA4P34932 840 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZNF445P59923 1031 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 CTDP1Q9Y5B0 961 aaPredicted RBP13.98□□□□□ -0.17
PRKAR1A-217ENST00000589228 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 ZBTB43O43298 467 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 BRD1O95696 1058 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 AXDND1Q5T1B0 1012 aaPredicted RBP13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 A1BGP04217 495 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 PTH1RQ03431 593 aa13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 NOM1Q5C9Z4 860 aaKnown RBP13.97□□□□□ -0.17
PRKAR1A-217ENST00000589228 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
PRKAR1A-217ENST00000589228 JAK2O60674 1132 aa13.96□□□□□ -0.17
PRKAR1A-217ENST00000589228 KIAA0232Q92628 1395 aa13.96□□□□□ -0.17
PRKAR1A-217ENST00000589228 A0A1B0GVL5 298 aa13.96□□□□□ -0.18
PRKAR1A-217ENST00000589228 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.18
PRKAR1A-217ENST00000589228 NLRP5P59047 1200 aa13.95□□□□□ -0.18
PRKAR1A-217ENST00000589228 KIF4BQ2VIQ3 1234 aa13.95□□□□□ -0.18
PRKAR1A-217ENST00000589228 CEP135Q66GS9 1140 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms