RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 UBTFL1P0CB47 393 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-220ENST00000588917 CHRNA5P30532 468 aa24.59■■□□□ 1.53
CIRBP-220ENST00000588917 HOXA10P31260 410 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-220ENST00000588917 PANK1Q8TE04 598 aa24.59■■□□□ 1.53
CIRBP-220ENST00000588917 RLBP1P12271 317 aa24.58■■□□□ 1.53
CIRBP-220ENST00000588917 KCNA3P22001 575 aa24.58■■□□□ 1.53
CIRBP-220ENST00000588917 DDX46Q7L014 1031 aaKnown RBP24.58■■□□□ 1.53
CIRBP-220ENST00000588917 ZNF622Q969S3 477 aaKnown RBP eCLIP24.58■■□□□ 1.53
CIRBP-220ENST00000588917 BCS1LQ9Y276 419 aa24.58■■□□□ 1.53
CIRBP-220ENST00000588917 CRAMP1Q96RY5 1269 aa24.57■■□□□ 1.52
CIRBP-220ENST00000588917 CEP350Q5VT06 3117 aa24.57■■□□□ 1.52
CIRBP-220ENST00000588917 CSF1RP07333 972 aa24.56■■□□□ 1.52
CIRBP-220ENST00000588917 CTSWP56202 376 aa24.56■■□□□ 1.52
CIRBP-220ENST00000588917 MVPQ14764 893 aaKnown RBP24.56■■□□□ 1.52
CIRBP-220ENST00000588917 TTLL6Q8N841 843 aa24.56■■□□□ 1.52
CIRBP-220ENST00000588917 TTLL11Q8NHH1 800 aa24.56■■□□□ 1.52
CIRBP-220ENST00000588917 DDX19BQ9UMR2 479 aa24.56■■□□□ 1.52
CIRBP-220ENST00000588917 ZBTB7BO15156 539 aaPredicted RBP24.55■■□□□ 1.52
CIRBP-220ENST00000588917 DALRD3Q5D0E6 543 aaKnown RBP24.55■■□□□ 1.52
CIRBP-220ENST00000588917 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
CIRBP-220ENST00000588917 FOXO4P98177 505 aa24.54■■□□□ 1.52
CIRBP-220ENST00000588917 C3orf67Q6ZVT6 689 aa24.54■■□□□ 1.52
CIRBP-220ENST00000588917 MEIS3Q99687 375 aa24.54■■□□□ 1.52
CIRBP-220ENST00000588917 BBOX1O75936 387 aa24.53■■□□□ 1.52
CIRBP-220ENST00000588917 GNAI2P04899 355 aa24.53■■□□□ 1.52
CIRBP-220ENST00000588917 ARHGAP27Q6ZUM4 889 aa24.53■■□□□ 1.52
CIRBP-220ENST00000588917 SUCLG2Q96I99 432 aa24.53■■□□□ 1.52
CIRBP-220ENST00000588917 COG6Q9Y2V7 657 aa24.53■■□□□ 1.52
CIRBP-220ENST00000588917 ANKRD31Q8N7Z5 1873 aa24.52■■□□□ 1.52
CIRBP-220ENST00000588917 LMBR1LQ6UX01 489 aa24.52■■□□□ 1.52
CIRBP-220ENST00000588917 TMC4Q7Z404 712 aa24.51■■□□□ 1.51
CIRBP-220ENST00000588917 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-220ENST00000588917 N4BP2Q86UW6 1770 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-220ENST00000588917 RTL9Q8NET4 1388 aa24.51■■□□□ 1.51
CIRBP-220ENST00000588917 GRAPQ13588 217 aa24.5■■□□□ 1.51
CIRBP-220ENST00000588917 RABL6Q3YEC7 729 aaPredicted RBP24.5■■□□□ 1.51
CIRBP-220ENST00000588917 C20orf194Q5TEA3 1177 aa24.5■■□□□ 1.51
CIRBP-220ENST00000588917 GRAPLQ8TC17 118 aaPredicted RBP24.5■■□□□ 1.51
CIRBP-220ENST00000588917 KAZALD1Q96I82 304 aa24.5■■□□□ 1.51
CIRBP-220ENST00000588917 CDC5LQ99459 802 aaKnown RBP24.5■■□□□ 1.51
CIRBP-220ENST00000588917 BICC1Q9H694 974 aaKnown RBP24.5■■□□□ 1.51
CIRBP-220ENST00000588917 HSPA6P17066 643 aa24.49■■□□□ 1.51
CIRBP-220ENST00000588917 IFIT5Q13325 482 aaKnown RBP24.49■■□□□ 1.51
CIRBP-220ENST00000588917 CCDC57Q2TAC2 916 aa24.49■■□□□ 1.51
CIRBP-220ENST00000588917 CHMP3Q9Y3E7 222 aa24.49■■□□□ 1.51
CIRBP-220ENST00000588917 DDX60Q8IY21 1712 aaKnown RBP24.49■■□□□ 1.51
CIRBP-220ENST00000588917 ANKRD18BA2A2Z9 1011 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 KIF3CO14782 793 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 RPS8P62241 208 aaKnown RBP24.48■■□□□ 1.51
CIRBP-220ENST00000588917 EPHA10Q5JZY3 1008 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 SOGA3Q5TF21 947 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 GREM2Q9H772 168 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 KIAA1551Q9HCM1 1747 aa24.48■■□□□ 1.51
CIRBP-220ENST00000588917 LRRFIP2Q9Y608 721 aaKnown RBP24.48■■□□□ 1.51
CIRBP-220ENST00000588917 LAMB2P55268 1798 aa24.47■■□□□ 1.51
CIRBP-220ENST00000588917 ITGA6P23229 1130 aa24.47■■□□□ 1.51
CIRBP-220ENST00000588917 GRIPAP1Q4V328 841 aa24.47■■□□□ 1.51
CIRBP-220ENST00000588917 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
CIRBP-220ENST00000588917 PRPF40BQ6NWY9 871 aaKnown RBP24.47■■□□□ 1.51
CIRBP-220ENST00000588917 CCDC85AQ96PX6 553 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-220ENST00000588917 TNRC6CQ9HCJ0 1690 aaKnown RBP24.46■■□□□ 1.51
CIRBP-220ENST00000588917 ANKRD18AQ8IVF6 992 aa24.46■■□□□ 1.51
CIRBP-220ENST00000588917 IGHMBP2P38935 993 aaKnown RBP24.45■■□□□ 1.5
CIRBP-220ENST00000588917 ANKRD44Q8N8A2 993 aa24.45■■□□□ 1.5
CIRBP-220ENST00000588917 SEC31BQ9NQW1 1179 aa24.45■■□□□ 1.5
CIRBP-220ENST00000588917 ZBTB40Q9NUA8 1239 aa24.45■■□□□ 1.5
CIRBP-220ENST00000588917 PPEF1O14829 653 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-220ENST00000588917 AAMPQ13685 434 aa24.44■■□□□ 1.5
CIRBP-220ENST00000588917 FAM161AQ3B820 660 aa24.44■■□□□ 1.5
CIRBP-220ENST00000588917 TAF7LQ5H9L4 462 aa24.44■■□□□ 1.5
CIRBP-220ENST00000588917 SP8Q8IXZ3 490 aa24.44■■□□□ 1.5
CIRBP-220ENST00000588917 CELF1Q92879 486 aaKnown RBP24.43■■□□□ 1.5
CIRBP-220ENST00000588917 MPHOSPH8Q99549 860 aa24.43■■□□□ 1.5
CIRBP-220ENST00000588917 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
CIRBP-220ENST00000588917 MTX1Q13505 466 aa24.42■■□□□ 1.5
CIRBP-220ENST00000588917 C7orf43Q8WVR3 580 aa24.42■■□□□ 1.5
CIRBP-220ENST00000588917 BSDC1Q9NW68 430 aaPredicted RBP24.42■■□□□ 1.5
CIRBP-220ENST00000588917 DLEC1Q9Y238 1755 aa24.42■■□□□ 1.5
CIRBP-220ENST00000588917 C21orf2O43822 256 aa24.41■■□□□ 1.5
CIRBP-220ENST00000588917 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
CIRBP-220ENST00000588917 RTKN2Q8IZC4 609 aa24.41■■□□□ 1.5
CIRBP-220ENST00000588917 COL11A2P13942 1736 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-220ENST00000588917 ATP8B2P98198 1209 aa24.4■■□□□ 1.5
CIRBP-220ENST00000588917 CCDC93Q567U6 631 aa24.4■■□□□ 1.5
CIRBP-220ENST00000588917 RPAP2Q8IXW5 612 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-220ENST00000588917 MYH3P11055 1940 aa24.39■■□□□ 1.5
CIRBP-220ENST00000588917 SRGAP3O43295 1099 aa24.39■■□□□ 1.49
CIRBP-220ENST00000588917 TOMM70O94826 608 aa24.39■■□□□ 1.49
CIRBP-220ENST00000588917 LDHAL6AQ6ZMR3 332 aa24.39■■□□□ 1.49
CIRBP-220ENST00000588917 ZNF219Q9P2Y4 722 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-220ENST00000588917 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
CIRBP-220ENST00000588917 FBXO3Q9UK99 471 aa24.38■■□□□ 1.49
CIRBP-220ENST00000588917 NMRK2Q9NPI5 230 aa24.37■■□□□ 1.49
CIRBP-220ENST00000588917 BRCA1P38398 1863 aaKnown RBP24.36■■□□□ 1.49
CIRBP-220ENST00000588917 C1orf115Q9H7X2 142 aa24.36■■□□□ 1.49
CIRBP-220ENST00000588917 CNNM1Q9NRU3 951 aa24.36■■□□□ 1.49
CIRBP-220ENST00000588917 ANKRD2Q9GZV1 360 aa24.35■■□□□ 1.49
CIRBP-220ENST00000588917 HMMRO75330 724 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 RFX5P48382 616 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-220ENST00000588917 APLP1P51693 650 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms