RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GRAPQ13588 217 aa17.83■□□□□ 0.44
HDAC5-208ENST00000588419 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.44
HDAC5-208ENST00000588419 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
HDAC5-208ENST00000588419 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
HDAC5-208ENST00000588419 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
HDAC5-208ENST00000588419 COL4A1P02462 1669 aa17.82■□□□□ 0.44
HDAC5-208ENST00000588419 BBOX1O75936 387 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 RAD17O75943 681 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
HDAC5-208ENST00000588419 DUSP27Q5VZP5 1158 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
HDAC5-208ENST00000588419 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
HDAC5-208ENST00000588419 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
HDAC5-208ENST00000588419 TRAF5O00463 557 aa17.8■□□□□ 0.44
HDAC5-208ENST00000588419 CXCL9Q07325 125 aa17.8■□□□□ 0.44
HDAC5-208ENST00000588419 CIAPIN1Q6FI81 312 aa17.8■□□□□ 0.44
HDAC5-208ENST00000588419 ANKRD13DQ6ZTN6 518 aa17.8■□□□□ 0.44
HDAC5-208ENST00000588419 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
HDAC5-208ENST00000588419 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
HDAC5-208ENST00000588419 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
HDAC5-208ENST00000588419 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
HDAC5-208ENST00000588419 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-208ENST00000588419 HOXB7P09629 217 aa17.79■□□□□ 0.44
HDAC5-208ENST00000588419 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
HDAC5-208ENST00000588419 CFAP44Q96MT7 982 aa17.79■□□□□ 0.44
HDAC5-208ENST00000588419 RTFDC1Q9BY42 306 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-208ENST00000588419 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
HDAC5-208ENST00000588419 THSD7BQ9C0I4 1608 aa17.79■□□□□ 0.44
HDAC5-208ENST00000588419 MYH3P11055 1940 aa17.78■□□□□ 0.44
HDAC5-208ENST00000588419 CTCFP49711 727 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-208ENST00000588419 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
HDAC5-208ENST00000588419 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
HDAC5-208ENST00000588419 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
HDAC5-208ENST00000588419 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
HDAC5-208ENST00000588419 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-208ENST00000588419 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
HDAC5-208ENST00000588419 APAF1O14727 1248 aa17.77■□□□□ 0.44
HDAC5-208ENST00000588419 RIMBP2O15034 1052 aa17.77■□□□□ 0.44
HDAC5-208ENST00000588419 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
HDAC5-208ENST00000588419 ZNF408Q9H9D4 720 aa17.77■□□□□ 0.44
HDAC5-208ENST00000588419 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.44
HDAC5-208ENST00000588419 C6orf229H3BNL8 230 aa17.76■□□□□ 0.43
HDAC5-208ENST00000588419 TNIP1Q15025 636 aa17.76■□□□□ 0.43
HDAC5-208ENST00000588419 CYP4F22Q6NT55 531 aa17.76■□□□□ 0.43
HDAC5-208ENST00000588419 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
HDAC5-208ENST00000588419 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 YDJCA8MPS7 323 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-208ENST00000588419 LBX1P52954 281 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 CAPNS2Q96L46 248 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 GPR101Q96P66 508 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-208ENST00000588419 MYD88Q99836 296 aa17.75■□□□□ 0.43
HDAC5-208ENST00000588419 GLIS2Q9BZE0 524 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-208ENST00000588419 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
HDAC5-208ENST00000588419 CELF2O95319 508 aaKnown RBP17.74■□□□□ 0.43
HDAC5-208ENST00000588419 WASHC4Q2M389 1173 aa17.74■□□□□ 0.43
HDAC5-208ENST00000588419 IFT57Q9NWB7 429 aa17.74■□□□□ 0.43
HDAC5-208ENST00000588419 WBP1LQ9NX94 342 aa17.74■□□□□ 0.43
HDAC5-208ENST00000588419 ECE1P42892 770 aa17.73■□□□□ 0.43
HDAC5-208ENST00000588419 GNAI1P63096 354 aa17.73■□□□□ 0.43
HDAC5-208ENST00000588419 GPSM2P81274 684 aa17.73■□□□□ 0.43
HDAC5-208ENST00000588419 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
HDAC5-208ENST00000588419 MICALL2Q8IY33 904 aa17.73■□□□□ 0.43
HDAC5-208ENST00000588419 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-208ENST00000588419 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-208ENST00000588419 PRDM10Q9NQV6 1147 aa17.73■□□□□ 0.43
HDAC5-208ENST00000588419 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-208ENST00000588419 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
HDAC5-208ENST00000588419 PSME4Q14997 1843 aa17.72■□□□□ 0.43
HDAC5-208ENST00000588419 H7C1D1 291 aa17.72■□□□□ 0.43
HDAC5-208ENST00000588419 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
HDAC5-208ENST00000588419 SF3B3Q15393 1217 aaKnown RBP17.72■□□□□ 0.43
HDAC5-208ENST00000588419 DOK7Q18PE1 504 aa17.72■□□□□ 0.43
HDAC5-208ENST00000588419 CST9Q5W186 159 aa17.72■□□□□ 0.43
HDAC5-208ENST00000588419 CNOT7Q9UIV1 285 aaKnown RBP17.72■□□□□ 0.43
HDAC5-208ENST00000588419 PSMD14O00487 310 aa17.71■□□□□ 0.43
HDAC5-208ENST00000588419 ECE2O60344 883 aa17.71■□□□□ 0.43
HDAC5-208ENST00000588419 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
HDAC5-208ENST00000588419 HSPA8P11142 646 aaKnown RBP17.71■□□□□ 0.43
HDAC5-208ENST00000588419 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
HDAC5-208ENST00000588419 TLL2Q9Y6L7 1015 aa17.71■□□□□ 0.43
HDAC5-208ENST00000588419 G3V3G9 751 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 AOC2O75106 756 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 HIRAP54198 1017 aaPredicted RBP17.7■□□□□ 0.42
HDAC5-208ENST00000588419 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 EYA3Q99504 573 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
HDAC5-208ENST00000588419 UFL1O94874 794 aa17.69■□□□□ 0.42
HDAC5-208ENST00000588419 TBC1D10BQ4KMP7 808 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-208ENST00000588419 RBM26Q5T8P6 1007 aaKnown RBP17.69■□□□□ 0.42
HDAC5-208ENST00000588419 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
HDAC5-208ENST00000588419 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms