RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PTPRCP08575 1304 aa17.96■□□□□ 0.47
CCDC43-203ENST00000588210 PDE6BP35913 854 aa17.96■□□□□ 0.47
CCDC43-203ENST00000588210 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 CIZ1Q9ULV3 898 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-203ENST00000588210 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 DDX11L8A8MPP1 907 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 KIF2CQ99661 725 aa17.95■□□□□ 0.46
CCDC43-203ENST00000588210 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
CCDC43-203ENST00000588210 FSD2A1L4K1 749 aa17.94■□□□□ 0.46
CCDC43-203ENST00000588210 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
CCDC43-203ENST00000588210 INTS3Q68E01 1043 aaKnown RBP17.94■□□□□ 0.46
CCDC43-203ENST00000588210 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
CCDC43-203ENST00000588210 DPEP1P16444 411 aa17.94■□□□□ 0.46
CCDC43-203ENST00000588210 KIAA1551Q9HCM1 1747 aa17.94■□□□□ 0.46
CCDC43-203ENST00000588210 H0YIN7 160 aa17.93■□□□□ 0.46
CCDC43-203ENST00000588210 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
CCDC43-203ENST00000588210 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
CCDC43-203ENST00000588210 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
CCDC43-203ENST00000588210 ANKRD31Q8N7Z5 1873 aa17.93■□□□□ 0.46
CCDC43-203ENST00000588210 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
CCDC43-203ENST00000588210 F6X3S4 739 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 CDC45O75419 566 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-203ENST00000588210 KLRG2A4D1S0 409 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-203ENST00000588210 TRAK2O60296 914 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 KCNA3P22001 575 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 C2CD5Q86YS7 1000 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 DCTPP1Q9H773 170 aa17.92■□□□□ 0.46
CCDC43-203ENST00000588210 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
CCDC43-203ENST00000588210 NEURL1BA8MQ27 555 aa17.91■□□□□ 0.46
CCDC43-203ENST00000588210 CHRNA5P30532 468 aa17.91■□□□□ 0.46
CCDC43-203ENST00000588210 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-203ENST00000588210 GOLGA6L3A6NEY3 463 aa17.91■□□□□ 0.46
CCDC43-203ENST00000588210 CWF19L2Q2TBE0 894 aaKnown RBP17.91■□□□□ 0.46
CCDC43-203ENST00000588210 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
CCDC43-203ENST00000588210 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
CCDC43-203ENST00000588210 BEND3Q5T5X7 828 aa17.9■□□□□ 0.46
CCDC43-203ENST00000588210 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
CCDC43-203ENST00000588210 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-203ENST00000588210 SRGNP10124 158 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 SLC4A10Q6U841 1118 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 ANKRD44Q8N8A2 993 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
CCDC43-203ENST00000588210 GCKRQ14397 625 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
CCDC43-203ENST00000588210 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
CCDC43-203ENST00000588210 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
CCDC43-203ENST00000588210 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
CCDC43-203ENST00000588210 MASTLQ96GX5 879 aa17.88■□□□□ 0.45
CCDC43-203ENST00000588210 DLEC1Q9Y238 1755 aa17.88■□□□□ 0.45
CCDC43-203ENST00000588210 K7ELQ4 463 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 STYK1Q6J9G0 422 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 BRCA1P38398 1863 aaKnown RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 GOLGB1Q14789 3259 aaKnown RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 NPR1P16066 1061 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 GPR162Q16538 588 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 TTC22Q5TAA0 569 aa17.87■□□□□ 0.45
CCDC43-203ENST00000588210 TNPO1Q92973 898 aaKnown RBP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC43-203ENST00000588210 XRCC6P12956 609 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 GBP4Q96PP9 640 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 TNRC6CQ9HCJ0 1690 aaKnown RBP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 COL11A2P13942 1736 aaPredicted RBP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 H7C1W4 665 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 TTLL6Q8N841 843 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 CNKSR1Q969H4 720 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 ISY1Q9ULR0 285 aaKnown RBP17.86■□□□□ 0.45
CCDC43-203ENST00000588210 BCS1LQ9Y276 419 aa17.86■□□□□ 0.45
CCDC43-203ENST00000588210 CD2BP2O95400 341 aaKnown RBP17.85■□□□□ 0.45
CCDC43-203ENST00000588210 PTMSP20962 102 aa17.85■□□□□ 0.45
CCDC43-203ENST00000588210 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
CCDC43-203ENST00000588210 WWC3Q9ULE0 1092 aa17.85■□□□□ 0.45
CCDC43-203ENST00000588210 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
CCDC43-203ENST00000588210 RPGRQ92834 1020 aaKnown RBP17.84■□□□□ 0.45
CCDC43-203ENST00000588210 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
CCDC43-203ENST00000588210 YBX3P16989 372 aaKnown RBP eCLIP17.84■□□□□ 0.457e-9■■■■■ 29.6
CCDC43-203ENST00000588210 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-203ENST00000588210 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
CCDC43-203ENST00000588210 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-203ENST00000588210 GRIN3BO60391 1043 aa17.83■□□□□ 0.45
CCDC43-203ENST00000588210 PDE8AO60658 829 aa17.83■□□□□ 0.45
CCDC43-203ENST00000588210 SF3B3Q15393 1217 aaKnown RBP17.83■□□□□ 0.45
CCDC43-203ENST00000588210 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.45
CCDC43-203ENST00000588210 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms