RNA–Protein interactions for RNA: ENST00000587377.5

ROGDI-207, Transcript of rogdi homolog, humanhuman

TSL 5

Gene ROGDI, Length 1,394 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-207ENST00000587377 LAMB2P55268 1798 aa23.29■■□□□ 1.32
ROGDI-207ENST00000587377 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
ROGDI-207ENST00000587377 DDX46Q7L014 1031 aaKnown RBP23.28■■□□□ 1.32
ROGDI-207ENST00000587377 KAZALD1Q96I82 304 aa23.28■■□□□ 1.32
ROGDI-207ENST00000587377 SYT17Q9BSW7 474 aa23.28■■□□□ 1.32
ROGDI-207ENST00000587377 LRRFIP2Q9Y608 721 aaKnown RBP23.28■■□□□ 1.32
ROGDI-207ENST00000587377 LMBR1LQ6UX01 489 aa23.27■■□□□ 1.32
ROGDI-207ENST00000587377 C3orf67Q6ZVT6 689 aa23.27■■□□□ 1.32
ROGDI-207ENST00000587377 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
ROGDI-207ENST00000587377 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
ROGDI-207ENST00000587377 BICC1Q9H694 974 aaKnown RBP23.27■■□□□ 1.32
ROGDI-207ENST00000587377 DDX60Q8IY21 1712 aaKnown RBP23.27■■□□□ 1.32
ROGDI-207ENST00000587377 DPEP1P16444 411 aa23.27■■□□□ 1.31
ROGDI-207ENST00000587377 CRBNQ96SW2 442 aa23.27■■□□□ 1.31
ROGDI-207ENST00000587377 ANKRD31Q8N7Z5 1873 aa23.26■■□□□ 1.31
ROGDI-207ENST00000587377 A0A0G2JLW4 131 aa23.26■■□□□ 1.31
ROGDI-207ENST00000587377 CHRNA5P30532 468 aa23.26■■□□□ 1.31
ROGDI-207ENST00000587377 EPHA10Q5JZY3 1008 aa23.26■■□□□ 1.31
ROGDI-207ENST00000587377 PIM2Q9P1W9 311 aa23.26■■□□□ 1.31
ROGDI-207ENST00000587377 MTX1Q13505 466 aa23.25■■□□□ 1.31
ROGDI-207ENST00000587377 CCDC57Q2TAC2 916 aa23.25■■□□□ 1.31
ROGDI-207ENST00000587377 ANKRD44Q8N8A2 993 aa23.25■■□□□ 1.31
ROGDI-207ENST00000587377 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.31
ROGDI-207ENST00000587377 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
ROGDI-207ENST00000587377 ANKRD18BA2A2Z9 1011 aa23.24■■□□□ 1.31
ROGDI-207ENST00000587377 BBOX1O75936 387 aa23.24■■□□□ 1.31
ROGDI-207ENST00000587377 IFIT5Q13325 482 aaKnown RBP23.24■■□□□ 1.31
ROGDI-207ENST00000587377 CHMP3Q9Y3E7 222 aa23.24■■□□□ 1.31
ROGDI-207ENST00000587377 TNRC6CQ9HCJ0 1690 aaKnown RBP23.24■■□□□ 1.31
ROGDI-207ENST00000587377 KCNA3P22001 575 aa23.23■■□□□ 1.31
ROGDI-207ENST00000587377 GRAPQ13588 217 aa23.23■■□□□ 1.31
ROGDI-207ENST00000587377 TMC4Q7Z404 712 aa23.23■■□□□ 1.31
ROGDI-207ENST00000587377 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
ROGDI-207ENST00000587377 GRAPLQ8TC17 118 aaPredicted RBP23.23■■□□□ 1.31
ROGDI-207ENST00000587377 GREM2Q9H772 168 aa23.23■■□□□ 1.31
ROGDI-207ENST00000587377 NEFLP07196 543 aa23.22■■□□□ 1.31
ROGDI-207ENST00000587377 ITGA6P23229 1130 aa23.22■■□□□ 1.31
ROGDI-207ENST00000587377 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
ROGDI-207ENST00000587377 NLGN2Q8NFZ4 835 aa23.22■■□□□ 1.31
ROGDI-207ENST00000587377 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
ROGDI-207ENST00000587377 CCDC85AQ96PX6 553 aaPredicted RBP23.21■■□□□ 1.31
ROGDI-207ENST00000587377 MYH3P11055 1940 aa23.21■■□□□ 1.31
ROGDI-207ENST00000587377 RPS8P62241 208 aaKnown RBP23.2■■□□□ 1.3
ROGDI-207ENST00000587377 ATP8B2P98198 1209 aa23.2■■□□□ 1.3
ROGDI-207ENST00000587377 DALRD3Q5D0E6 543 aaKnown RBP23.2■■□□□ 1.3
ROGDI-207ENST00000587377 ANKRD18AQ8IVF6 992 aa23.2■■□□□ 1.3
ROGDI-207ENST00000587377 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
ROGDI-207ENST00000587377 TAF7LQ5H9L4 462 aa23.19■■□□□ 1.3
ROGDI-207ENST00000587377 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
ROGDI-207ENST00000587377 C1orf115Q9H7X2 142 aa23.19■■□□□ 1.3
ROGDI-207ENST00000587377 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
ROGDI-207ENST00000587377 SEC31BQ9NQW1 1179 aa23.18■■□□□ 1.3
ROGDI-207ENST00000587377 HMMRO75330 724 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 PRPF40BQ6NWY9 871 aaKnown RBP23.17■■□□□ 1.3
ROGDI-207ENST00000587377 CEP85Q6P2H3 762 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 EXOC6Q8TAG9 804 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 KIAA1551Q9HCM1 1747 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 FBXO3Q9UK99 471 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
ROGDI-207ENST00000587377 COL11A2P13942 1736 aaPredicted RBP23.17■■□□□ 1.3
ROGDI-207ENST00000587377 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
ROGDI-207ENST00000587377 SOGA3Q5TF21 947 aa23.16■■□□□ 1.3
ROGDI-207ENST00000587377 CELF1Q92879 486 aaKnown RBP23.16■■□□□ 1.3
ROGDI-207ENST00000587377 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
ROGDI-207ENST00000587377 PPEF1O14829 653 aaPredicted RBP23.15■■□□□ 1.3
ROGDI-207ENST00000587377 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
ROGDI-207ENST00000587377 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.3
ROGDI-207ENST00000587377 POLA2Q14181 598 aa23.14■■□□□ 1.3
ROGDI-207ENST00000587377 SP8Q8IXZ3 490 aa23.14■■□□□ 1.3
ROGDI-207ENST00000587377 COPRSQ9NQ92 184 aa23.14■■□□□ 1.3
ROGDI-207ENST00000587377 ATP6V0A2Q9Y487 856 aa23.14■■□□□ 1.3
ROGDI-207ENST00000587377 RFX5P48382 616 aaPredicted RBP23.14■■□□□ 1.29
ROGDI-207ENST00000587377 LDHAL6AQ6ZMR3 332 aa23.14■■□□□ 1.29
ROGDI-207ENST00000587377 BCS1LQ9Y276 419 aa23.14■■□□□ 1.29
ROGDI-207ENST00000587377 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
ROGDI-207ENST00000587377 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
ROGDI-207ENST00000587377 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
ROGDI-207ENST00000587377 CIAO1O76071 339 aa23.11■■□□□ 1.29
ROGDI-207ENST00000587377 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
ROGDI-207ENST00000587377 EYA2O00167 538 aa23.1■■□□□ 1.29
ROGDI-207ENST00000587377 CCDC93Q567U6 631 aa23.1■■□□□ 1.29
ROGDI-207ENST00000587377 ZNF594Q96JF6 807 aaPredicted RBP23.1■■□□□ 1.29
ROGDI-207ENST00000587377 ANKRD2Q9GZV1 360 aa23.1■■□□□ 1.29
ROGDI-207ENST00000587377 HSP90AB4PQ58FF6 505 aa23.09■■□□□ 1.29
ROGDI-207ENST00000587377 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
ROGDI-207ENST00000587377 RTKN2Q8IZC4 609 aa23.09■■□□□ 1.29
ROGDI-207ENST00000587377 PCDHB15Q9Y5E8 787 aa23.09■■□□□ 1.29
ROGDI-207ENST00000587377 BRCA1P38398 1863 aaKnown RBP23.08■■□□□ 1.29
ROGDI-207ENST00000587377 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
ROGDI-207ENST00000587377 C21orf2O43822 256 aa23.08■■□□□ 1.29
ROGDI-207ENST00000587377 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
ROGDI-207ENST00000587377 SIRT2Q8IXJ6 389 aa23.08■■□□□ 1.29
ROGDI-207ENST00000587377 NOP58Q9Y2X3 529 aaKnown RBP23.08■■□□□ 1.29
ROGDI-207ENST00000587377 MROH5Q6ZUA9 1318 aa23.07■■□□□ 1.28
ROGDI-207ENST00000587377 SRCAPQ6ZRS2 3230 aa23.07■■□□□ 1.28
ROGDI-207ENST00000587377 IL15P40933 162 aaPredicted RBP23.07■■□□□ 1.28
ROGDI-207ENST00000587377 KLHDC4Q8TBB5 520 aa23.07■■□□□ 1.28
ROGDI-207ENST00000587377 MINPP1Q9UNW1 487 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms