RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, human

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA3-219	ENST00000584550	NLRP3	Q96P20	1036 aa		13.55	□□□□□ -0.24
GGA3-219	ENST00000584550	VPS33B	Q9H267	617 aa		13.55	□□□□□ -0.24
GGA3-219	ENST00000584550	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA3-219	ENST00000584550	ZNF157	P51786	506 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	TAF7	Q15545	349 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	RBM26	Q5T8P6	1007 aa	Known RBP	13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	ZNF34	Q8IZ26	560 aa		13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	MPND	Q8N594	471 aa		13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	ABCC4	O15439	1325 aa		13.54	□□□□□ -0.24
GGA3-219	ENST00000584550	POLR2A	P24928	1970 aa	Known RBP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	YDJC	A8MPS7	323 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	ADM5	C9JUS6	153 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	KRT26	Q7Z3Y9	468 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	C2orf69	Q8N8R5	385 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	GBA2	Q9HCG7	927 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	SAGE1	Q9NXZ1	904 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	LAMB4	A4D0S4	1761 aa		13.53	□□□□□ -0.24
GGA3-219	ENST00000584550	AKAP11	Q9UKA4	1901 aa		13.52	□□□□□ -0.24
GGA3-219	ENST00000584550	EGFR	P00533	1210 aa		13.52	□□□□□ -0.25
GGA3-219	ENST00000584550	KIAA2012	Q0VF49	1180 aa		13.52	□□□□□ -0.25
GGA3-219	ENST00000584550	PPP1R42	Q7Z4L9	355 aa		13.52	□□□□□ -0.25
GGA3-219	ENST00000584550	CCDC102A	Q96A19	550 aa		13.52	□□□□□ -0.25
GGA3-219	ENST00000584550	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	CDHR2	Q9BYE9	1310 aa		13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	CTU1	Q7Z7A3	348 aa	Known RBP	13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	SP8	Q8IXZ3	490 aa		13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	ZNF428	Q96B54	188 aa		13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	CFAP53	Q96M91	514 aa		13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	CSRNP1	Q96S65	589 aa		13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	UTP14A	Q9BVJ6	771 aa	Known RBP	13.51	□□□□□ -0.25
GGA3-219	ENST00000584550	TAF1	P21675	1872 aa		13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	BBOX1	O75936	387 aa		13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	HCLS1	P14317	486 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	DCPS	Q96C86	337 aa	Known RBP	13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	THUMPD2	Q9BTF0	503 aa	Known RBP	13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	HPS5	Q9UPZ3	1129 aa		13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	NUDC	Q9Y266	331 aa		13.5	□□□□□ -0.25
GGA3-219	ENST00000584550	PSMD14	O00487	310 aa		13.49	□□□□□ -0.25
GGA3-219	ENST00000584550	RIMBP2	O15034	1052 aa		13.49	□□□□□ -0.25
GGA3-219	ENST00000584550	SLC10A5	Q5PT55	438 aa		13.49	□□□□□ -0.25
GGA3-219	ENST00000584550	DBNDD1	Q9H9R9	158 aa		13.49	□□□□□ -0.25
GGA3-219	ENST00000584550	KCNQ5	Q9NR82	932 aa		13.49	□□□□□ -0.25
GGA3-219	ENST00000584550	LAMB2	P55268	1798 aa		13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	HTATSF1	O43719	755 aa	Known RBP	13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	EIF4A1	P60842	406 aa	Known RBP	13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	DDX10	Q13206	875 aa	Known RBP	13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	PARP10	Q53GL7	1025 aa		13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	DDX46	Q7L014	1031 aa	Known RBP	13.48	□□□□□ -0.25
GGA3-219	ENST00000584550	SLC10A3	P09131	477 aa		13.47	□□□□□ -0.25
GGA3-219	ENST00000584550	WASHC4	Q2M389	1173 aa		13.47	□□□□□ -0.25
GGA3-219	ENST00000584550	HDAC9	Q9UKV0	1011 aa		13.47	□□□□□ -0.25
GGA3-219	ENST00000584550	ASTN2	O75129	1339 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	TBC1D8	O95759	1140 aa		13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	ANXA1	P04083	346 aa		13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	EIF2S2	P20042	333 aa	Known RBP	13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	GRAP	Q13588	217 aa		13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	DOK7	Q18PE1	504 aa		13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	GRAPL	Q8TC17	118 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	DPF2	Q92785	391 aa		13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.46	□□□□□ -0.25
GGA3-219	ENST00000584550	KDM3B	Q7LBC6	1761 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	C6orf229	H3BNL8	230 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	SULF1	Q8IWU6	871 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	PNISR	Q8TF01	805 aa	Known RBP	13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	CDCA5	Q96FF9	252 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	ANKRD36C	Q5JPF3	1778 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	DUOX1	Q9NRD9	1551 aa		13.45	□□□□□ -0.26
GGA3-219	ENST00000584550	AIMP1	Q12904	312 aa	Known RBP	13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	PROSER3	Q2NL68	480 aa		13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	KIF4B	Q2VIQ3	1234 aa		13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	RASAL3	Q86YV0	1011 aa		13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	GGA3	Q9NZ52	723 aa		13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	TRMT112	Q9UI30	125 aa	Known RBP	13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	SCAF8	Q9UPN6	1271 aa	Known RBP	13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	DLG5	Q8TDM6	1919 aa		13.44	□□□□□ -0.26
GGA3-219	ENST00000584550	ECE2	O60344	883 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	MOB2	Q70IA6	237 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	NLRP10	Q86W26	655 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	NECTIN2	Q92692	538 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	POLL	Q9UGP5	575 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	RTL9	Q8NET4	1388 aa		13.43	□□□□□ -0.26
GGA3-219	ENST00000584550	PPP2R1A	P30153	589 aa		13.42	□□□□□ -0.26
GGA3-219	ENST00000584550	GPSM2	P81274	684 aa		13.42	□□□□□ -0.26
GGA3-219	ENST00000584550	PDIA6	Q15084	440 aa		13.42	□□□□□ -0.26
GGA3-219	ENST00000584550	PKN2	Q16513	984 aa	Known RBP	13.42	□□□□□ -0.26
GGA3-219	ENST00000584550	MKI67	P46013	3256 aa	Known RBP	13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	RPS12	P25398	132 aa	Known RBP	13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	MKRN3	Q13064	507 aa	Known RBP	13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	SCARF1	Q14162	830 aa		13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	ANGEL2	Q5VTE6	544 aa	Known RBP	13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	COPS6	Q7L5N1	327 aa		13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	LRP10	Q7Z4F1	713 aa		13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	REM2	Q8IYK8	340 aa	Predicted RBP	13.41	□□□□□ -0.26
GGA3-219	ENST00000584550	CELF1	Q92879	486 aa	Known RBP	13.41	□□□□□ -0.26

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