RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 JARID2Q92833 1246 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 SF3B3Q15393 1217 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 EAPPQ56P03 285 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 GPC2Q8N158 579 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 TAF1DQ9H5J8 278 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 HACL1Q9UJ83 578 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 COL4A5P29400 1685 aa17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 DDX60Q8IY21 1712 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-233ENST00000584186 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
CDK5RAP3-233ENST00000584186 DNAJC5GQ8N7S2 189 aa17.49■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-233ENST00000584186 TAF1P21675 1872 aa17.48■□□□□ 0.39
CDK5RAP3-233ENST00000584186 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-233ENST00000584186 G2E3Q7L622 706 aa17.48■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
CDK5RAP3-233ENST00000584186 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 EPHX2P34913 555 aa17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 TMC4Q7Z404 712 aa17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-233ENST00000584186 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-233ENST00000584186 LDHDQ86WU2 507 aa17.46■□□□□ 0.39
CDK5RAP3-233ENST00000584186 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
CDK5RAP3-233ENST00000584186 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-233ENST00000584186 SCN4AP35499 1836 aa17.46■□□□□ 0.39
CDK5RAP3-233ENST00000584186 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 RPS8P62241 208 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
CDK5RAP3-233ENST00000584186 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 PDE8AO60658 829 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 VAMP4O75379 141 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 FLIIQ13045 1269 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
CDK5RAP3-233ENST00000584186 COL4A1P02462 1669 aa17.43■□□□□ 0.38
CDK5RAP3-233ENST00000584186 GPSM2P81274 684 aa17.43■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CXCL9Q07325 125 aa17.43■□□□□ 0.38
CDK5RAP3-233ENST00000584186 NEURL1BA8MQ27 555 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 RIMBP2O15034 1052 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 RAD17O75943 681 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 EPS15P42566 896 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 SCNN1DP51172 638 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
CDK5RAP3-233ENST00000584186 PCNTO95613 3336 aa17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 UBE3BQ7Z3V4 1068 aa17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 ANKIB1Q9P2G1 1089 aa17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 POLLQ9UGP5 575 aa17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CTSWP56202 376 aa17.4■□□□□ 0.38
CDK5RAP3-233ENST00000584186 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
CDK5RAP3-233ENST00000584186 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-233ENST00000584186 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
CDK5RAP3-233ENST00000584186 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
CDK5RAP3-233ENST00000584186 GMPSP49915 693 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 TNIP1Q15025 636 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 TBC1D16Q8TBP0 767 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 EYA3Q99504 573 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
CDK5RAP3-233ENST00000584186 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 YDJCA8MPS7 323 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 GCKRQ14397 625 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
CDK5RAP3-233ENST00000584186 H7C1W4 665 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 UFL1O94874 794 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 ITGBL1O95965 494 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 ZC3H12CQ9C0D7 883 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 GREM2Q9H772 168 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
CDK5RAP3-233ENST00000584186 F6X3S4 739 aa17.36■□□□□ 0.37
CDK5RAP3-233ENST00000584186 G3V3G9 751 aa17.36■□□□□ 0.37
CDK5RAP3-233ENST00000584186 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms