RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
SKA2-208ENST00000583927 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 FSTL1Q12841 308 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 FLIIQ13045 1269 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
SKA2-208ENST00000583927 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
SKA2-208ENST00000583927 RRAGCQ9HB90 399 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 ZNF277Q9NRM2 450 aaPredicted RBP12.68□□□□□ -0.38
SKA2-208ENST00000583927 PCNTO95613 3336 aa12.68□□□□□ -0.38
SKA2-208ENST00000583927 POTECB2RU33 542 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 HSPA6P17066 643 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 G2E3Q7L622 706 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
SKA2-208ENST00000583927 DUOX1Q9NRD9 1551 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 COL4A5P29400 1685 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 PSME4Q14997 1843 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
SKA2-208ENST00000583927 E9PSI1 815 aa12.66□□□□□ -0.38
SKA2-208ENST00000583927 PDE8AO60658 829 aa12.66□□□□□ -0.38
SKA2-208ENST00000583927 SUPT20HQ8NEM7 779 aa12.66□□□□□ -0.38
SKA2-208ENST00000583927 ADAMTSL1Q8N6G6 1762 aa12.66□□□□□ -0.38
SKA2-208ENST00000583927 COL4A1P02462 1669 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 JDP2Q8WYK2 163 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 ZNF428Q96B54 188 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
SKA2-208ENST00000583927 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
SKA2-208ENST00000583927 H7C1W4 665 aa12.64□□□□□ -0.39
SKA2-208ENST00000583927 TCERG1O14776 1098 aaKnown RBP12.64□□□□□ -0.39
SKA2-208ENST00000583927 FKBP5Q13451 457 aaPredicted RBP12.64□□□□□ -0.39
SKA2-208ENST00000583927 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
SKA2-208ENST00000583927 GPC2Q8N158 579 aa12.64□□□□□ -0.39
SKA2-208ENST00000583927 MPNDQ8N594 471 aa12.64□□□□□ -0.39
SKA2-208ENST00000583927 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
SKA2-208ENST00000583927 DDNO94850 711 aaPredicted RBP12.63□□□□□ -0.39
SKA2-208ENST00000583927 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
SKA2-208ENST00000583927 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
SKA2-208ENST00000583927 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
SKA2-208ENST00000583927 GCKRQ14397 625 aa12.63□□□□□ -0.39
SKA2-208ENST00000583927 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
SKA2-208ENST00000583927 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
SKA2-208ENST00000583927 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
SKA2-208ENST00000583927 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
SKA2-208ENST00000583927 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
SKA2-208ENST00000583927 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
SKA2-208ENST00000583927 A0A1B0GUL6 1792 aa12.62□□□□□ -0.39
SKA2-208ENST00000583927 APLP1P51693 650 aa12.62□□□□□ -0.39
SKA2-208ENST00000583927 CASP7P55210 303 aa12.62□□□□□ -0.39
SKA2-208ENST00000583927 CWF19L2Q2TBE0 894 aaKnown RBP12.62□□□□□ -0.39
SKA2-208ENST00000583927 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
SKA2-208ENST00000583927 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 PPIP5K2O43314 1243 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
SKA2-208ENST00000583927 CTSWP56202 376 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
SKA2-208ENST00000583927 SLC51AQ86UW1 340 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
SKA2-208ENST00000583927 TRPM7Q96QT4 1865 aa12.6□□□□□ -0.39
SKA2-208ENST00000583927 AOC3Q16853 763 aa12.6□□□□□ -0.39
SKA2-208ENST00000583927 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
SKA2-208ENST00000583927 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
SKA2-208ENST00000583927 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
SKA2-208ENST00000583927 CSF1RP07333 972 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
SKA2-208ENST00000583927 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
SKA2-208ENST00000583927 CDC5LQ99459 802 aaKnown RBP12.59□□□□□ -0.39
SKA2-208ENST00000583927 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
SKA2-208ENST00000583927 PTPRCP08575 1304 aa12.59□□□□□ -0.39
SKA2-208ENST00000583927 ZNF646O15015 1829 aaPredicted RBP12.58□□□□□ -0.4
SKA2-208ENST00000583927 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
SKA2-208ENST00000583927 WASHC4Q2M389 1173 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
SKA2-208ENST00000583927 EYA3Q99504 573 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
SKA2-208ENST00000583927 POLLQ9UGP5 575 aa12.58□□□□□ -0.4
SKA2-208ENST00000583927 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
SKA2-208ENST00000583927 F6X3S4 739 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 EPHX2P34913 555 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 SCNN1DP51172 638 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
SKA2-208ENST00000583927 GPSM2P81274 684 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 CXCL9Q07325 125 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
SKA2-208ENST00000583927 GREM2Q9H772 168 aa12.57□□□□□ -0.4
SKA2-208ENST00000583927 XDHP47989 1333 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms