RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 GTPBP4Q9BZE4 634 aaKnown RBP12.36□□□□□ -0.43
RNF43-207ENST00000583753 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 CCDC66A2RUB6 948 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 GRM8O00222 908 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 ZBTB22O15209 634 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
RNF43-207ENST00000583753 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
RNF43-207ENST00000583753 A0A087WZG4 1122 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 TRDNQ13061 729 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 CLSTN2Q9H4D0 955 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
RNF43-207ENST00000583753 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 HOXC9P31274 260 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 KRT32Q14532 448 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 CCDC144BQ3MJ40 725 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
RNF43-207ENST00000583753 USP27XA6NNY8 438 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 TFCP2Q12800 502 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 TRIM29Q14134 588 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 ERCC6LQ2NKX8 1250 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 SHROOM2Q13796 1616 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
RNF43-207ENST00000583753 TIMM10P62072 90 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 GOLGA8FQ08AF8 430 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 GOLGA8DPQ0D2H9 430 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
RNF43-207ENST00000583753 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 ABCC3O15438 1527 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 FLT4P35916 1363 aa12.34□□□□□ -0.43
RNF43-207ENST00000583753 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.43
RNF43-207ENST00000583753 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
RNF43-207ENST00000583753 TTC14Q96N46 770 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 PRDM4Q9UKN5 801 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
RNF43-207ENST00000583753 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
RNF43-207ENST00000583753 KSR2Q6VAB6 950 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
RNF43-207ENST00000583753 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
RNF43-207ENST00000583753 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 RASSF8Q8NHQ8 419 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 ST7Q9NRC1 585 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
RNF43-207ENST00000583753 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
RNF43-207ENST00000583753 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
RNF43-207ENST00000583753 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
RNF43-207ENST00000583753 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
RNF43-207ENST00000583753 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 ZNF397Q8NF99 534 aaPredicted RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 CHD1O14646 1710 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 GNG11P61952 73 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 LMBR1LQ6UX01 489 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 LRRC8AQ8IWT6 810 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 GJB4Q9NTQ9 266 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
RNF43-207ENST00000583753 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
RNF43-207ENST00000583753 UHRF1BP1LA0JNW5 1464 aa12.3□□□□□ -0.44
RNF43-207ENST00000583753 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
RNF43-207ENST00000583753 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
RNF43-207ENST00000583753 TOP1P11387 765 aaKnown RBP12.3□□□□□ -0.44
RNF43-207ENST00000583753 TTC39AQ5SRH9 613 aa12.3□□□□□ -0.44
RNF43-207ENST00000583753 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
RNF43-207ENST00000583753 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
RNF43-207ENST00000583753 FEZ1Q99689 392 aa12.3□□□□□ -0.44
RNF43-207ENST00000583753 KARSQ15046 597 aaKnown RBP12.3□□□□□ -0.44
RNF43-207ENST00000583753 XPO4Q9C0E2 1151 aaKnown RBP12.3□□□□□ -0.44
RNF43-207ENST00000583753 UBASH3AP57075 661 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 MCMDC2Q4G0Z9 681 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
RNF43-207ENST00000583753 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 ADGRB3O60242 1522 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
RNF43-207ENST00000583753 KIF20AO95235 890 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 GPS2Q13227 327 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms