RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 GJA3Q9Y6H8 435 aa27.45■■□□□ 1.98
CSNK1D-215ENST00000580784 NCBP3Q53F19 620 aaKnown RBP27.44■■□□□ 1.98
CSNK1D-215ENST00000580784 DPP8Q6V1X1 898 aaPredicted RBP27.44■■□□□ 1.98
CSNK1D-215ENST00000580784 RTFDC1Q9BY42 306 aaPredicted RBP27.44■■□□□ 1.98
CSNK1D-215ENST00000580784 IL16Q14005 1332 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 EPHX2P34913 555 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 EAPPQ56P03 285 aaPredicted RBP27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 LDHDQ86WU2 507 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 NIM1KQ8IY84 436 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 ZBTB38Q8NAP3 1195 aaPredicted RBP27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 SUPT20HQ8NEM7 779 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 VPS33BQ9H267 617 aa27.43■■□□□ 1.98
CSNK1D-215ENST00000580784 DDX58O95786 925 aaKnown RBP27.42■■□□□ 1.98
CSNK1D-215ENST00000580784 TWISTNBQ3B726 338 aaPredicted RBP27.42■■□□□ 1.98
CSNK1D-215ENST00000580784 CELF1Q92879 486 aaKnown RBP27.42■■□□□ 1.98
CSNK1D-215ENST00000580784 METTL22Q9BUU2 404 aaPredicted RBP27.42■■□□□ 1.98
CSNK1D-215ENST00000580784 CCDC191Q8NCU4 936 aa27.41■■□□□ 1.98
CSNK1D-215ENST00000580784 MAP3K2Q9Y2U5 619 aa27.41■■□□□ 1.98
CSNK1D-215ENST00000580784 TMC4Q7Z404 712 aa27.4■■□□□ 1.98
CSNK1D-215ENST00000580784 JARID2Q92833 1246 aaPredicted RBP27.4■■□□□ 1.98
CSNK1D-215ENST00000580784 STK31Q9BXU1 1019 aa27.4■■□□□ 1.98
CSNK1D-215ENST00000580784 CLEC11AQ9Y240 323 aa27.4■■□□□ 1.98
CSNK1D-215ENST00000580784 COL4A1P02462 1669 aa27.4■■□□□ 1.98
CSNK1D-215ENST00000580784 CWC25Q9NXE8 425 aaPredicted RBP27.39■■□□□ 1.98
CSNK1D-215ENST00000580784 LRRC37AA6NMS7 1700 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 PI4KAP2A4QPH2 592 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 KSR2Q6VAB6 950 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 PNMA8AQ86V59 439 aaPredicted RBP27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 PI4KAP1Q8N8J0 262 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 ZNRF3Q9ULT6 936 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 LTBP1Q14766 1721 aa27.38■■□□□ 1.97
CSNK1D-215ENST00000580784 ADAMTSL1Q8N6G6 1762 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 PCCAP05165 728 aaPredicted RBP27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 KIAA2012Q0VF49 1180 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 G2E3Q7L622 706 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 WDR63Q8IWG1 891 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 FAM9BQ8IZU0 186 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 JMYQ8N9B5 988 aa27.37■■□□□ 1.97
CSNK1D-215ENST00000580784 SLC4A2P04920 1241 aa27.36■■□□□ 1.97
CSNK1D-215ENST00000580784 EPS15P42566 896 aa27.36■■□□□ 1.97
CSNK1D-215ENST00000580784 SCNN1DP51172 638 aa27.36■■□□□ 1.97
CSNK1D-215ENST00000580784 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
CSNK1D-215ENST00000580784 PCNTO95613 3336 aa27.36■■□□□ 1.97
CSNK1D-215ENST00000580784 DUOX1Q9NRD9 1551 aa27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 ITGBL1O95965 494 aaPredicted RBP27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 LMOD1P29536 600 aaPredicted RBP27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 RPS8P62241 208 aaKnown RBP27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 CXCL9Q07325 125 aa27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 SEC31BQ9NQW1 1179 aa27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 NSFL1CQ9UNZ2 370 aaKnown RBP27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 PASKQ96RG2 1323 aa27.35■■□□□ 1.97
CSNK1D-215ENST00000580784 IGKV5-2P06315 115 aa27.34■■□□□ 1.97
CSNK1D-215ENST00000580784 HSP90B1P14625 803 aaKnown RBP27.34■■□□□ 1.97
CSNK1D-215ENST00000580784 PDE8AO60658 829 aa27.33■■□□□ 1.97
CSNK1D-215ENST00000580784 GPSM2P81274 684 aa27.32■■□□□ 1.96
CSNK1D-215ENST00000580784 MAP1SQ66K74 1059 aaPredicted RBP27.32■■□□□ 1.96
CSNK1D-215ENST00000580784 CREBZFQ9NS37 354 aa27.32■■□□□ 1.96
CSNK1D-215ENST00000580784 VAMP4O75379 141 aa27.31■■□□□ 1.96
CSNK1D-215ENST00000580784 CNTROBQ8N137 903 aa27.31■■□□□ 1.96
CSNK1D-215ENST00000580784 CCDC85AQ96PX6 553 aaPredicted RBP27.31■■□□□ 1.96
CSNK1D-215ENST00000580784 SPINK5Q9NQ38 1064 aaPredicted RBP27.31■■□□□ 1.96
CSNK1D-215ENST00000580784 CACNA1FO60840 1977 aa27.31■■□□□ 1.96
CSNK1D-215ENST00000580784 RAD17O75943 681 aa27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 NEXNQ0ZGT2 675 aa27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 WASHC4Q2M389 1173 aa27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 CWF19L2Q2TBE0 894 aaKnown RBP27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 CCDC152Q4G0S7 254 aa27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 POLLQ9UGP5 575 aa27.3■■□□□ 1.96
CSNK1D-215ENST00000580784 YDJCA8MPS7 323 aa27.29■■□□□ 1.96
CSNK1D-215ENST00000580784 C6orf229H3BNL8 230 aa27.29■■□□□ 1.96
CSNK1D-215ENST00000580784 CIAPIN1Q6FI81 312 aa27.29■■□□□ 1.96
CSNK1D-215ENST00000580784 GPRC5DQ9NZD1 345 aa27.29■■□□□ 1.96
CSNK1D-215ENST00000580784 CDHR2Q9BYE9 1310 aa27.28■■□□□ 1.96
CSNK1D-215ENST00000580784 RIMBP2O15034 1052 aa27.28■■□□□ 1.96
CSNK1D-215ENST00000580784 FLIIQ13045 1269 aa27.28■■□□□ 1.96
CSNK1D-215ENST00000580784 NEURL1BA8MQ27 555 aa27.27■■□□□ 1.96
CSNK1D-215ENST00000580784 GMPSP49915 693 aaPredicted RBP27.27■■□□□ 1.96
CSNK1D-215ENST00000580784 TNIP1Q15025 636 aa27.27■■□□□ 1.96
CSNK1D-215ENST00000580784 USP50Q70EL3 339 aaPredicted RBP27.27■■□□□ 1.96
CSNK1D-215ENST00000580784 MKRN1Q9UHC7 482 aaKnown RBP27.27■■□□□ 1.96
CSNK1D-215ENST00000580784 TBC1D16Q8TBP0 767 aa27.26■■□□□ 1.95
CSNK1D-215ENST00000580784 GPR101Q96P66 508 aaPredicted RBP27.26■■□□□ 1.95
CSNK1D-215ENST00000580784 MYH3P11055 1940 aa27.26■■□□□ 1.95
CSNK1D-215ENST00000580784 TMEM88BA6NKF7 163 aa27.25■■□□□ 1.95
CSNK1D-215ENST00000580784 FKBP5Q13451 457 aaPredicted RBP27.25■■□□□ 1.95
CSNK1D-215ENST00000580784 DBNDD1Q9H9R9 158 aa27.25■■□□□ 1.95
CSNK1D-215ENST00000580784 BCL2L13Q9BXK5 485 aa27.24■■□□□ 1.95
CSNK1D-215ENST00000580784 ADARB2Q9NS39 739 aaKnown RBP27.24■■□□□ 1.95
CSNK1D-215ENST00000580784 H7C1W4 665 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 CTSWP56202 376 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 DOK7Q18PE1 504 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 TTLL11Q8NHH1 800 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 EYA3Q99504 573 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 PODXL2Q9NZ53 605 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 ANKIB1Q9P2G1 1089 aa27.23■■□□□ 1.95
CSNK1D-215ENST00000580784 UBE3BQ7Z3V4 1068 aa27.22■■□□□ 1.95
CSNK1D-215ENST00000580784 ANKRD18AQ8IVF6 992 aa27.22■■□□□ 1.95
CSNK1D-215ENST00000580784 DNAAF4Q8WXU2 420 aa27.22■■□□□ 1.95
CSNK1D-215ENST00000580784 MYH16Q9H6N6 1097 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms