RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SP8Q8IXZ3 490 aa21.25■□□□□ 0.99
SREBF1-219ENST00000580540 DDX60Q8IY21 1712 aaKnown RBP21.25■□□□□ 0.99
SREBF1-219ENST00000580540 JDP2Q8WYK2 163 aa21.25■□□□□ 0.99
SREBF1-219ENST00000580540 LARGE2Q8N3Y3 721 aa21.24■□□□□ 0.99
SREBF1-219ENST00000580540 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
SREBF1-219ENST00000580540 CCDC85AQ96PX6 553 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-219ENST00000580540 PDE8AO60658 829 aa21.23■□□□□ 0.99
SREBF1-219ENST00000580540 DPP8Q6V1X1 898 aaPredicted RBP21.23■□□□□ 0.99
SREBF1-219ENST00000580540 MPNDQ8N594 471 aa21.23■□□□□ 0.99
SREBF1-219ENST00000580540 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
SREBF1-219ENST00000580540 TAF1P21675 1872 aa21.23■□□□□ 0.99
SREBF1-219ENST00000580540 SNED1Q8TER0 1413 aa21.22■□□□□ 0.99
SREBF1-219ENST00000580540 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
SREBF1-219ENST00000580540 E9PSI1 815 aa21.22■□□□□ 0.99
SREBF1-219ENST00000580540 RBM46Q8TBY0 533 aaKnown RBP21.22■□□□□ 0.99
SREBF1-219ENST00000580540 ZNF541Q9H0D2 1346 aa21.22■□□□□ 0.99
SREBF1-219ENST00000580540 PPIP5K2O43314 1243 aa21.21■□□□□ 0.99
SREBF1-219ENST00000580540 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
SREBF1-219ENST00000580540 TMC4Q7Z404 712 aa21.21■□□□□ 0.99
SREBF1-219ENST00000580540 SUPT20HQ8NEM7 779 aa21.21■□□□□ 0.99
SREBF1-219ENST00000580540 SEC31BQ9NQW1 1179 aa21.21■□□□□ 0.99
SREBF1-219ENST00000580540 POTECB2RU33 542 aa21.2■□□□□ 0.98
SREBF1-219ENST00000580540 F6X3S4 739 aa21.2■□□□□ 0.98
SREBF1-219ENST00000580540 MIER1Q8N108 512 aa21.2■□□□□ 0.98
SREBF1-219ENST00000580540 FZD9O00144 591 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 HSPA6P17066 643 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 EIF6P56537 245 aaKnown RBP21.19■□□□□ 0.98
SREBF1-219ENST00000580540 RPS8P62241 208 aaKnown RBP21.19■□□□□ 0.98
SREBF1-219ENST00000580540 SLFN5Q08AF3 891 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 AOC3Q16853 763 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 NIM1KQ8IY84 436 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 NSFL1CQ9UNZ2 370 aaKnown RBP21.19■□□□□ 0.98
SREBF1-219ENST00000580540 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 CDHR2Q9BYE9 1310 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 CACNA1FO60840 1977 aa21.19■□□□□ 0.98
SREBF1-219ENST00000580540 GCKRQ14397 625 aa21.18■□□□□ 0.98
SREBF1-219ENST00000580540 LINS1Q8NG48 757 aa21.17■□□□□ 0.98
SREBF1-219ENST00000580540 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
SREBF1-219ENST00000580540 H7C1W4 665 aa21.16■□□□□ 0.98
SREBF1-219ENST00000580540 CTSWP56202 376 aa21.16■□□□□ 0.98
SREBF1-219ENST00000580540 SMC1BQ8NDV3 1235 aa21.16■□□□□ 0.98
SREBF1-219ENST00000580540 RTFDC1Q9BY42 306 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-219ENST00000580540 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 C6orf229H3BNL8 230 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 GPSM2P81274 684 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 FSTL1Q12841 308 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 SLC4A10Q6U841 1118 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 COL4A5P29400 1685 aa21.15■□□□□ 0.98
SREBF1-219ENST00000580540 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.97
SREBF1-219ENST00000580540 GPC2Q8N158 579 aa21.14■□□□□ 0.97
SREBF1-219ENST00000580540 TTLL11Q8NHH1 800 aa21.14■□□□□ 0.97
SREBF1-219ENST00000580540 VPS33BQ9H267 617 aa21.14■□□□□ 0.97
SREBF1-219ENST00000580540 COL4A1P02462 1669 aa21.13■□□□□ 0.97
SREBF1-219ENST00000580540 RIMBP2O15034 1052 aa21.13■□□□□ 0.97
SREBF1-219ENST00000580540 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-219ENST00000580540 GREM2Q9H772 168 aa21.13■□□□□ 0.97
SREBF1-219ENST00000580540 ANKIB1Q9P2G1 1089 aa21.13■□□□□ 0.97
SREBF1-219ENST00000580540 HACL1Q9UJ83 578 aa21.13■□□□□ 0.97
SREBF1-219ENST00000580540 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
SREBF1-219ENST00000580540 EAPPQ56P03 285 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-219ENST00000580540 BEND3Q5T5X7 828 aa21.12■□□□□ 0.97
SREBF1-219ENST00000580540 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
SREBF1-219ENST00000580540 CDC5LQ99459 802 aaKnown RBP21.12■□□□□ 0.97
SREBF1-219ENST00000580540 TAF1DQ9H5J8 278 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-219ENST00000580540 ZNRF3Q9ULT6 936 aa21.12■□□□□ 0.97
SREBF1-219ENST00000580540 WASHC4Q2M389 1173 aa21.11■□□□□ 0.97
SREBF1-219ENST00000580540 GPR101Q96P66 508 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-219ENST00000580540 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
SREBF1-219ENST00000580540 POLLQ9UGP5 575 aa21.11■□□□□ 0.97
SREBF1-219ENST00000580540 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
SREBF1-219ENST00000580540 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
SREBF1-219ENST00000580540 APLP1P51693 650 aa21.1■□□□□ 0.97
SREBF1-219ENST00000580540 SSH1Q8WYL5 1049 aa21.1■□□□□ 0.97
SREBF1-219ENST00000580540 CLEC11AQ9Y240 323 aa21.1■□□□□ 0.97
SREBF1-219ENST00000580540 RAD17O75943 681 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 UFL1O94874 794 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 LMOD1P29536 600 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-219ENST00000580540 EPHX2P34913 555 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 CASP7P55210 303 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 CXCL9Q07325 125 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 TBC1D16Q8TBP0 767 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 EYA3Q99504 573 aa21.09■□□□□ 0.97
SREBF1-219ENST00000580540 C9orf78Q9NZ63 289 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-219ENST00000580540 LRRC37AA6NMS7 1700 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 CHADLQ6NUI6 762 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 PLA2G12BQ9BX93 195 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 SRCIN1Q9C0H9 1055 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 GGA1Q9UJY5 639 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 CHMP3Q9Y3E7 222 aa21.08■□□□□ 0.97
SREBF1-219ENST00000580540 G3V3G9 751 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
SREBF1-219ENST00000580540 DOK7Q18PE1 504 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 FAM161AQ3B820 660 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 DCAF8Q5TAQ9 597 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 CIAPIN1Q6FI81 312 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 TRMT2AQ8IZ69 625 aaKnown RBP21.07■□□□□ 0.96
SREBF1-219ENST00000580540 ZC3H12CQ9C0D7 883 aaKnown RBP21.07■□□□□ 0.96
SREBF1-219ENST00000580540 DBNDD1Q9H9R9 158 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms