RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
CSNK1D-212ENST00000580061 TAF1P21675 1872 aa19.89■□□□□ 0.77
CSNK1D-212ENST00000580061 MTX1Q13505 466 aa19.89■□□□□ 0.77
CSNK1D-212ENST00000580061 CRY2Q49AN0 593 aa19.89■□□□□ 0.77
CSNK1D-212ENST00000580061 CEP85Q6P2H3 762 aa19.89■□□□□ 0.77
CSNK1D-212ENST00000580061 PCDHB15Q9Y5E8 787 aa19.88■□□□□ 0.77
CSNK1D-212ENST00000580061 RTL9Q8NET4 1388 aa19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 ATP8B2P98198 1209 aa19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 CCDC152Q4G0S7 254 aa19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 RPAP2Q8IXW5 612 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 CCDC85AQ96PX6 553 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 GREM2Q9H772 168 aa19.87■□□□□ 0.77
CSNK1D-212ENST00000580061 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 PDZRN3Q9UPQ7 1066 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 CD2APQ9Y5K6 639 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 LRP5O75197 1615 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 SPEF2Q9C093 1822 aa19.86■□□□□ 0.77
CSNK1D-212ENST00000580061 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
CSNK1D-212ENST00000580061 SRGAP3O43295 1099 aa19.85■□□□□ 0.77
CSNK1D-212ENST00000580061 SRGNP10124 158 aa19.85■□□□□ 0.77
CSNK1D-212ENST00000580061 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
CSNK1D-212ENST00000580061 COL4A1P02462 1669 aa19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 H0YIN7 160 aa19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 ITGA6P23229 1130 aa19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 HOXA10P31260 410 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 C2CD5Q86YS7 1000 aa19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 RPGRQ92834 1020 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 BRCA1P38398 1863 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-212ENST00000580061 CHRNA5P30532 468 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 TGFB2P61812 414 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 IFIT5Q13325 482 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 POLA2Q14181 598 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 CCDC57Q2TAC2 916 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 SSH3Q8TE77 659 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
CSNK1D-212ENST00000580061 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 NPR1P16066 1061 aa19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 MASTLQ96GX5 879 aa19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 RBM17Q96I25 401 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 PPP1R1BQ9UD71 204 aaPredicted RBP19.82■□□□□ 0.76
CSNK1D-212ENST00000580061 STYK1Q6J9G0 422 aa19.81■□□□□ 0.76
CSNK1D-212ENST00000580061 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
CSNK1D-212ENST00000580061 HMMRO75330 724 aa19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 DPEP1P16444 411 aa19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 KCNA3P22001 575 aa19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 PTPN12Q05209 780 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 CELF1Q92879 486 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 CDC5LQ99459 802 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-212ENST00000580061 A0A0G2JLW4 131 aa19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 GRAPQ13588 217 aa19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 ZNF622Q969S3 477 aaKnown RBP eCLIP19.79■□□□□ 0.769e-8■□□□□ 10
CSNK1D-212ENST00000580061 ZNF594Q96JF6 807 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 FHDC1Q9C0D6 1143 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 COPRSQ9NQ92 184 aa19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
CSNK1D-212ENST00000580061 ALDH1B1P30837 517 aa19.78■□□□□ 0.76
CSNK1D-212ENST00000580061 HDAC1Q13547 482 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-212ENST00000580061 TAF7LQ5H9L4 462 aa19.78■□□□□ 0.76
CSNK1D-212ENST00000580061 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-212ENST00000580061 RPS8P62241 208 aaKnown RBP19.77■□□□□ 0.76
CSNK1D-212ENST00000580061 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
CSNK1D-212ENST00000580061 NLGN2Q8NFZ4 835 aa19.77■□□□□ 0.76
CSNK1D-212ENST00000580061 CNKSR1Q969H4 720 aa19.77■□□□□ 0.76
CSNK1D-212ENST00000580061 A0A1B0GUL6 1792 aa19.77■□□□□ 0.76
CSNK1D-212ENST00000580061 LRRC37AA6NMS7 1700 aa19.76■□□□□ 0.75
CSNK1D-212ENST00000580061 IGHMBP2P38935 993 aaKnown RBP19.76■□□□□ 0.75
CSNK1D-212ENST00000580061 SRCAPQ6ZRS2 3230 aa19.76■□□□□ 0.75
CSNK1D-212ENST00000580061 BBOX1O75936 387 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 IGHDP01880 384 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 LDHAL6AQ6ZMR3 332 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 MPHOSPH8Q99549 860 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 RWDD1Q9H446 243 aaPredicted RBP19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-212ENST00000580061 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 PUS3Q9BZE2 481 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 SIL1Q9H173 461 aa19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 BSDC1Q9NW68 430 aaPredicted RBP19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 PIM2Q9P1W9 311 aa19.74■□□□□ 0.75
CSNK1D-212ENST00000580061 EYA2O00167 538 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 PPEF1O14829 653 aaPredicted RBP19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 CIAO1O76071 339 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 LRRC24Q50LG9 513 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 TTLL6Q8N841 843 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 CNNM1Q9NRU3 951 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 RIPOR2Q9Y4F9 1068 aa19.73■□□□□ 0.75
CSNK1D-212ENST00000580061 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms