RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 CCDC152Q4G0S7 254 aa22.23■■□□□ 1.15
ITGB4-205ENST00000579211 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
ITGB4-205ENST00000579211 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
ITGB4-205ENST00000579211 ZNF277Q9NRM2 450 aaPredicted RBP22.23■■□□□ 1.15
ITGB4-205ENST00000579211 ATP6V0A2Q9Y487 856 aa22.23■■□□□ 1.15
ITGB4-205ENST00000579211 TMC4Q7Z404 712 aa22.22■■□□□ 1.15
ITGB4-205ENST00000579211 SP8Q8IXZ3 490 aa22.22■■□□□ 1.15
ITGB4-205ENST00000579211 CDHR2Q9BYE9 1310 aa22.22■■□□□ 1.15
ITGB4-205ENST00000579211 GCKRQ14397 625 aa22.21■■□□□ 1.15
ITGB4-205ENST00000579211 UBE3BQ7Z3V4 1068 aa22.21■■□□□ 1.15
ITGB4-205ENST00000579211 CCDC85AQ96PX6 553 aaPredicted RBP22.21■■□□□ 1.15
ITGB4-205ENST00000579211 PSMD1Q99460 953 aa22.21■■□□□ 1.15
ITGB4-205ENST00000579211 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
ITGB4-205ENST00000579211 C16orf71Q8IYS4 520 aaPredicted RBP22.2■■□□□ 1.14
ITGB4-205ENST00000579211 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
ITGB4-205ENST00000579211 MPNDQ8N594 471 aa22.2■■□□□ 1.14
ITGB4-205ENST00000579211 MRPL50Q8N5N7 158 aaKnown RBP22.2■■□□□ 1.14
ITGB4-205ENST00000579211 JDP2Q8WYK2 163 aa22.2■■□□□ 1.14
ITGB4-205ENST00000579211 GLTPD2A6NH11 291 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 ALDH1L2Q3SY69 923 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 DPP8Q6V1X1 898 aaPredicted RBP22.19■■□□□ 1.14
ITGB4-205ENST00000579211 SUPT20HQ8NEM7 779 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 BCL2L13Q9BXK5 485 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 SMC4Q9NTJ3 1288 aa22.19■■□□□ 1.14
ITGB4-205ENST00000579211 H7C1W4 665 aa22.18■■□□□ 1.14
ITGB4-205ENST00000579211 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
ITGB4-205ENST00000579211 RPS8P62241 208 aaKnown RBP22.18■■□□□ 1.14
ITGB4-205ENST00000579211 CELF1Q92879 486 aaKnown RBP22.18■■□□□ 1.14
ITGB4-205ENST00000579211 RRAGCQ9HB90 399 aa22.18■■□□□ 1.14
ITGB4-205ENST00000579211 NMRK2Q9NPI5 230 aa22.18■■□□□ 1.14
ITGB4-205ENST00000579211 PTPRCP08575 1304 aa22.17■■□□□ 1.14
ITGB4-205ENST00000579211 LARGE2Q8N3Y3 721 aa22.17■■□□□ 1.14
ITGB4-205ENST00000579211 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
ITGB4-205ENST00000579211 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
ITGB4-205ENST00000579211 CTSWP56202 376 aa22.16■■□□□ 1.14
ITGB4-205ENST00000579211 BEND3Q5T5X7 828 aa22.16■■□□□ 1.14
ITGB4-205ENST00000579211 SEC31BQ9NQW1 1179 aa22.16■■□□□ 1.14
ITGB4-205ENST00000579211 LRRC37AA6NMS7 1700 aa22.16■■□□□ 1.14
ITGB4-205ENST00000579211 C1QTNF8P60827 252 aa22.15■■□□□ 1.14
ITGB4-205ENST00000579211 NSFL1CQ9UNZ2 370 aaKnown RBP22.15■■□□□ 1.14
ITGB4-205ENST00000579211 PPIP5K2O43314 1243 aa22.14■■□□□ 1.13
ITGB4-205ENST00000579211 SLC51AQ86UW1 340 aa22.14■■□□□ 1.13
ITGB4-205ENST00000579211 ANKRD18AQ8IVF6 992 aa22.14■■□□□ 1.13
ITGB4-205ENST00000579211 CDC5LQ99459 802 aaKnown RBP22.14■■□□□ 1.13
ITGB4-205ENST00000579211 KIF3CO14782 793 aa22.13■■□□□ 1.13
ITGB4-205ENST00000579211 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
ITGB4-205ENST00000579211 EIF6P56537 245 aaKnown RBP22.13■■□□□ 1.13
ITGB4-205ENST00000579211 TTLL11Q8NHH1 800 aa22.13■■□□□ 1.13
ITGB4-205ENST00000579211 WDR90Q96KV7 1748 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 C6orf229H3BNL8 230 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 NIM1KQ8IY84 436 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 VPS33BQ9H267 617 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 CHMP3Q9Y3E7 222 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 SCN4AP35499 1836 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 SNED1Q8TER0 1413 aa22.12■■□□□ 1.13
ITGB4-205ENST00000579211 GRM8O00222 908 aa22.11■■□□□ 1.13
ITGB4-205ENST00000579211 DDNO94850 711 aaPredicted RBP22.11■■□□□ 1.13
ITGB4-205ENST00000579211 VEGFAP15692 232 aaPredicted RBP22.11■■□□□ 1.13
ITGB4-205ENST00000579211 AOC3Q16853 763 aa22.11■■□□□ 1.13
ITGB4-205ENST00000579211 GREM2Q9H772 168 aa22.11■■□□□ 1.13
ITGB4-205ENST00000579211 ANKIB1Q9P2G1 1089 aa22.11■■□□□ 1.13
ITGB4-205ENST00000579211 PLA2G12BQ9BX93 195 aa22.1■■□□□ 1.13
ITGB4-205ENST00000579211 COL4A1P02462 1669 aa22.1■■□□□ 1.13
ITGB4-205ENST00000579211 TOMM70O94826 608 aa22.09■■□□□ 1.13
ITGB4-205ENST00000579211 IGHMBP2P38935 993 aaKnown RBP22.09■■□□□ 1.13
ITGB4-205ENST00000579211 GPSM2P81274 684 aa22.09■■□□□ 1.13
ITGB4-205ENST00000579211 EYA3Q99504 573 aa22.09■■□□□ 1.13
ITGB4-205ENST00000579211 RTFDC1Q9BY42 306 aaPredicted RBP22.09■■□□□ 1.13
ITGB4-205ENST00000579211 NOB1Q9ULX3 412 aaKnown RBP22.09■■□□□ 1.13
ITGB4-205ENST00000579211 GJA3Q9Y6H8 435 aa22.09■■□□□ 1.13
ITGB4-205ENST00000579211 FZD9O00144 591 aa22.08■■□□□ 1.13
ITGB4-205ENST00000579211 CASP7P55210 303 aa22.08■■□□□ 1.13
ITGB4-205ENST00000579211 WASHC4Q2M389 1173 aa22.08■■□□□ 1.13
ITGB4-205ENST00000579211 ANKRD18BA2A2Z9 1011 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 G3V3G9 751 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 RIMBP2O15034 1052 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 ITGA6P23229 1130 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 RARSP54136 660 aaKnown RBP22.07■■□□□ 1.12
ITGB4-205ENST00000579211 DCAF8Q5TAQ9 597 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 MPHOSPH8Q99549 860 aa22.07■■□□□ 1.12
ITGB4-205ENST00000579211 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
ITGB4-205ENST00000579211 ZNF541Q9H0D2 1346 aa22.06■■□□□ 1.12
ITGB4-205ENST00000579211 API5Q9BZZ5 524 aaKnown RBP22.06■■□□□ 1.12
ITGB4-205ENST00000579211 RTL9Q8NET4 1388 aa22.06■■□□□ 1.12
ITGB4-205ENST00000579211 IQCA1LA6NCM1 817 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 CSF1RP07333 972 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 KIAA2012Q0VF49 1180 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 IFIT5Q13325 482 aaKnown RBP22.05■■□□□ 1.12
ITGB4-205ENST00000579211 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 TAF7LQ5H9L4 462 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 GPC2Q8N158 579 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 ZC3H12CQ9C0D7 883 aaKnown RBP22.05■■□□□ 1.12
ITGB4-205ENST00000579211 BSDC1Q9NW68 430 aaPredicted RBP22.05■■□□□ 1.12
ITGB4-205ENST00000579211 GGA1Q9UJY5 639 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 ZNRF3Q9ULT6 936 aa22.05■■□□□ 1.12
ITGB4-205ENST00000579211 LTBP1Q14766 1721 aa22.04■■□□□ 1.12
ITGB4-205ENST00000579211 UFL1O94874 794 aa22.04■■□□□ 1.12
ITGB4-205ENST00000579211 CCDC57Q2TAC2 916 aa22.04■■□□□ 1.12
ITGB4-205ENST00000579211 LMBR1LQ6UX01 489 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms