RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
MKS1-207ENST00000578789 F6X3S4 739 aa18.41■□□□□ 0.54
MKS1-207ENST00000578789 PDE8AO60658 829 aa18.41■□□□□ 0.54
MKS1-207ENST00000578789 GCKRQ14397 625 aa18.41■□□□□ 0.54
MKS1-207ENST00000578789 GRIPAP1Q4V328 841 aa18.41■□□□□ 0.54
MKS1-207ENST00000578789 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
MKS1-207ENST00000578789 H7C1W4 665 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 BBOX1O75936 387 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 PSMD1Q99460 953 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 ATP6V0A2Q9Y487 856 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 PTPRCP08575 1304 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
MKS1-207ENST00000578789 CASP7P55210 303 aa18.39■□□□□ 0.53
MKS1-207ENST00000578789 TMC4Q7Z404 712 aa18.39■□□□□ 0.53
MKS1-207ENST00000578789 SLC51AQ86UW1 340 aa18.39■□□□□ 0.53
MKS1-207ENST00000578789 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
MKS1-207ENST00000578789 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
MKS1-207ENST00000578789 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
MKS1-207ENST00000578789 GPBP1L1Q9HC44 474 aaPredicted RBP18.38■□□□□ 0.53
MKS1-207ENST00000578789 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
MKS1-207ENST00000578789 CTSWP56202 376 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 UBE3BQ7Z3V4 1068 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 SP8Q8IXZ3 490 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 CELF1Q92879 486 aaKnown RBP18.37■□□□□ 0.53
MKS1-207ENST00000578789 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 DUOX1Q9NRD9 1551 aa18.37■□□□□ 0.53
MKS1-207ENST00000578789 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
MKS1-207ENST00000578789 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
MKS1-207ENST00000578789 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
MKS1-207ENST00000578789 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
MKS1-207ENST00000578789 COL4A5P29400 1685 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 IARSP41252 1262 aaKnown RBP18.34■□□□□ 0.53
MKS1-207ENST00000578789 RARSP54136 660 aaKnown RBP18.34■□□□□ 0.53
MKS1-207ENST00000578789 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
MKS1-207ENST00000578789 SRCIN1Q9C0H9 1055 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 SEC31BQ9NQW1 1179 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 SPEF2Q9C093 1822 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 WDR90Q96KV7 1748 aa18.34■□□□□ 0.53
MKS1-207ENST00000578789 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.53
MKS1-207ENST00000578789 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
MKS1-207ENST00000578789 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
MKS1-207ENST00000578789 GRM8O00222 908 aa18.32■□□□□ 0.52
MKS1-207ENST00000578789 SUPT20HQ8NEM7 779 aa18.32■□□□□ 0.52
MKS1-207ENST00000578789 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
MKS1-207ENST00000578789 UTYO14607 1347 aa18.31■□□□□ 0.52
MKS1-207ENST00000578789 KIF3CO14782 793 aa18.31■□□□□ 0.52
MKS1-207ENST00000578789 CSF1RP07333 972 aa18.31■□□□□ 0.52
MKS1-207ENST00000578789 DPP8Q6V1X1 898 aaPredicted RBP18.31■□□□□ 0.52
MKS1-207ENST00000578789 MPNDQ8N594 471 aa18.31■□□□□ 0.52
MKS1-207ENST00000578789 CCDC85AQ96PX6 553 aaPredicted RBP18.31■□□□□ 0.52
MKS1-207ENST00000578789 GREM2Q9H772 168 aa18.31■□□□□ 0.52
MKS1-207ENST00000578789 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
MKS1-207ENST00000578789 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
MKS1-207ENST00000578789 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
MKS1-207ENST00000578789 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
MKS1-207ENST00000578789 FZD9O00144 591 aa18.29■□□□□ 0.52
MKS1-207ENST00000578789 FOXO4P98177 505 aa18.29■□□□□ 0.52
MKS1-207ENST00000578789 ANKRD18AQ8IVF6 992 aa18.29■□□□□ 0.52
MKS1-207ENST00000578789 GPSM2P81274 684 aa18.28■□□□□ 0.52
MKS1-207ENST00000578789 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
MKS1-207ENST00000578789 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
MKS1-207ENST00000578789 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
MKS1-207ENST00000578789 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
MKS1-207ENST00000578789 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
MKS1-207ENST00000578789 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
MKS1-207ENST00000578789 A0A1B0GUL6 1792 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 ZNF541Q9H0D2 1346 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 PPIP5K2O43314 1243 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 KIAA2012Q0VF49 1180 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 AOC3Q16853 763 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
MKS1-207ENST00000578789 SCN4AP35499 1836 aa18.26■□□□□ 0.51
MKS1-207ENST00000578789 ITGA6P23229 1130 aa18.26■□□□□ 0.51
MKS1-207ENST00000578789 EPHA10Q5JZY3 1008 aa18.26■□□□□ 0.51
MKS1-207ENST00000578789 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
MKS1-207ENST00000578789 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
MKS1-207ENST00000578789 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
MKS1-207ENST00000578789 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
MKS1-207ENST00000578789 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
MKS1-207ENST00000578789 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
MKS1-207ENST00000578789 SUCLG2Q96I99 432 aa18.25■□□□□ 0.51
MKS1-207ENST00000578789 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
MKS1-207ENST00000578789 POTECB2RU33 542 aa18.24■□□□□ 0.51
MKS1-207ENST00000578789 DDNO94850 711 aaPredicted RBP18.24■□□□□ 0.51
MKS1-207ENST00000578789 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
MKS1-207ENST00000578789 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
MKS1-207ENST00000578789 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
MKS1-207ENST00000578789 L3MBTL3Q96JM7 780 aaPredicted RBP18.24■□□□□ 0.51
MKS1-207ENST00000578789 RRAGCQ9HB90 399 aa18.24■□□□□ 0.51
MKS1-207ENST00000578789 XDHP47989 1333 aa18.23■□□□□ 0.51
MKS1-207ENST00000578789 ANKRD18BA2A2Z9 1011 aa18.23■□□□□ 0.51
MKS1-207ENST00000578789 BCAR3O75815 825 aa18.23■□□□□ 0.51
MKS1-207ENST00000578789 RABL6Q3YEC7 729 aaPredicted RBP18.23■□□□□ 0.51
MKS1-207ENST00000578789 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms