RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CDC42BPGQ6DT37 1551 aa16.15■□□□□ 0.18
NDEL1-204ENST00000578172 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
NDEL1-204ENST00000578172 TTLL5Q6EMB2 1281 aa16.15■□□□□ 0.18
NDEL1-204ENST00000578172 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
NDEL1-204ENST00000578172 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.15■□□□□ 0.18
NDEL1-204ENST00000578172 V9GYY5 206 aaPredicted RBP16.15■□□□□ 0.18
NDEL1-204ENST00000578172 A0A0G2JLW4 131 aa16.14■□□□□ 0.18
NDEL1-204ENST00000578172 EVA1CP58658 441 aa16.14■□□□□ 0.18
NDEL1-204ENST00000578172 VPS53Q5VIR6 699 aa16.14■□□□□ 0.18
NDEL1-204ENST00000578172 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.18
NDEL1-204ENST00000578172 DLG5Q8TDM6 1919 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 ZNF771Q7L3S4 317 aaPredicted RBP16.14■□□□□ 0.17
NDEL1-204ENST00000578172 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 CPLX1O14810 134 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
NDEL1-204ENST00000578172 ADCY9O60503 1353 aa16.14■□□□□ 0.17
NDEL1-204ENST00000578172 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 POLA2Q14181 598 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 DDX21Q9NR30 783 aaKnown RBP eCLIP16.13■□□□□ 0.17
NDEL1-204ENST00000578172 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
NDEL1-204ENST00000578172 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 ZSCAN31Q96LW9 406 aaPredicted RBP16.13■□□□□ 0.17
NDEL1-204ENST00000578172 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
NDEL1-204ENST00000578172 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 PDCL3Q9H2J4 239 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 GJB4Q9NTQ9 266 aa16.13■□□□□ 0.17
NDEL1-204ENST00000578172 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.12■□□□□ 0.17
NDEL1-204ENST00000578172 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 TYRO3Q06418 890 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 GCKRQ14397 625 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 PYCARDQ9ULZ3 195 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 IFIT1P09914 478 aaKnown RBP16.12■□□□□ 0.17
NDEL1-204ENST00000578172 PDCP20941 246 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 HSPA2P54652 639 aa16.12■□□□□ 0.17
NDEL1-204ENST00000578172 NEURL1BA8MQ27 555 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 NR1I2O75469 434 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 ZNF165P49910 485 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 TPD52L1Q16890 204 aaPredicted RBP16.11■□□□□ 0.17
NDEL1-204ENST00000578172 CCDC73Q6ZRK6 1079 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 SH2B1Q9NRF2 756 aaPredicted RBP16.11■□□□□ 0.17
NDEL1-204ENST00000578172 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 RPAP1Q9BWH6 1393 aaPredicted RBP16.11■□□□□ 0.17
NDEL1-204ENST00000578172 HELBQ8NG08 1087 aaPredicted RBP16.11■□□□□ 0.17
NDEL1-204ENST00000578172 TTC14Q96N46 770 aa16.11■□□□□ 0.17
NDEL1-204ENST00000578172 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
NDEL1-204ENST00000578172 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
NDEL1-204ENST00000578172 ALDH1L1O75891 902 aa16.1■□□□□ 0.17
NDEL1-204ENST00000578172 PUS3Q9BZE2 481 aaKnown RBP16.1■□□□□ 0.17
NDEL1-204ENST00000578172 RICTORQ6R327 1708 aa16.1■□□□□ 0.17
NDEL1-204ENST00000578172 LRRC24Q50LG9 513 aa16.1■□□□□ 0.17
NDEL1-204ENST00000578172 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
NDEL1-204ENST00000578172 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
NDEL1-204ENST00000578172 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 RPS6KB1P23443 525 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 KAZALD1Q96I82 304 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 HIP1O00291 1037 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
NDEL1-204ENST00000578172 SMC2O95347 1197 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 ZSWIM6Q9HCJ5 1215 aa16.09■□□□□ 0.17
NDEL1-204ENST00000578172 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.17
NDEL1-204ENST00000578172 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
NDEL1-204ENST00000578172 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
NDEL1-204ENST00000578172 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
NDEL1-204ENST00000578172 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
NDEL1-204ENST00000578172 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
NDEL1-204ENST00000578172 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
NDEL1-204ENST00000578172 MTMR7Q9Y216 660 aa16.08■□□□□ 0.16
NDEL1-204ENST00000578172 CCAR1Q8IX12 1150 aaKnown RBP16.07■□□□□ 0.16
NDEL1-204ENST00000578172 KDRP35968 1356 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 STK38Q15208 465 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 CCDC57Q2TAC2 916 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 SYNE4Q8N205 404 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 CEP126Q9P2H0 1117 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
NDEL1-204ENST00000578172 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
NDEL1-204ENST00000578172 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 CYP21A2P08686 494 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 AP5Z1O43299 807 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-204ENST00000578172 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 ST3GAL1Q11201 340 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms