RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MAP2K2P36507 400 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 IGKV5-2P06315 115 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 AAMPQ13685 434 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 HLFQ16534 295 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 TSKSQ9UJT2 592 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZPR1O75312 459 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 CNTROBQ8N137 903 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 TMEM57Q8N5G2 664 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 SRCIN1Q9C0H9 1055 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 UTYO14607 1347 aa14.07□□□□□ -0.16
CDK5RAP3-204ENST00000577664 NUP98P52948 1817 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 NEURL1BA8MQ27 555 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 SOX10P56693 466 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 HABP4Q5JVS0 413 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 USPL1Q5W0Q7 1092 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 FTSJ3Q8IY81 847 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 PANK1Q8TE04 598 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 BCORQ6W2J9 1755 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ARFGEF2Q9Y6D5 1785 aa14.06□□□□□ -0.16
CDK5RAP3-204ENST00000577664 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
CDK5RAP3-204ENST00000577664 USP44Q9H0E7 712 aa14.05□□□□□ -0.16
CDK5RAP3-204ENST00000577664 DDX19BQ9UMR2 479 aa14.05□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-204ENST00000577664 H7C1W4 665 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 GCKRQ14397 625 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 SLC4A10Q6U841 1118 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 NLRP10Q86W26 655 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 MYD88Q99836 296 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 SCN7AQ01118 1682 aa14.04□□□□□ -0.16
CDK5RAP3-204ENST00000577664 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-204ENST00000577664 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-204ENST00000577664 ZBTB40Q9NUA8 1239 aa14.03□□□□□ -0.16
CDK5RAP3-204ENST00000577664 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
CDK5RAP3-204ENST00000577664 COG6Q9Y2V7 657 aa14.03□□□□□ -0.16
CDK5RAP3-204ENST00000577664 H0YIN7 160 aa14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CASP7P55210 303 aa14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TBC1D9BQ66K14 1250 aa14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ZBTB38Q8NAP3 1195 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CWC25Q9NXE8 425 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TLL2Q9Y6L7 1015 aa14.02□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 UBN2Q6ZU65 1347 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 GRM8O00222 908 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 GNAI3P08754 354 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 EPHX2P34913 555 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 C2CD5Q86YS7 1000 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 SETDB2Q96T68 719 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 HDAC5Q9UQL6 1122 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
CDK5RAP3-204ENST00000577664 C21orf2O43822 256 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 AOC2O75106 756 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NFIXQ14938 502 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ITPRIPQ8IWB1 547 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CRBNQ96SW2 442 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 PLA2G12BQ9BX93 195 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 PDZRN3Q9UPQ7 1066 aa14□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CDHR2Q9BYE9 1310 aa13.99□□□□□ -0.17
CDK5RAP3-204ENST00000577664 SUSD4Q5VX71 490 aa13.99□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NYXQ9GZU5 481 aa13.99□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NTSR2O95665 410 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 SERPINB2P05120 415 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 FXR1P51114 621 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CST9Q5W186 159 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TPTE2Q6XPS3 522 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 HHIPL1Q96JK4 782 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 MEIS3Q99687 375 aa13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 UTP14AQ9BVJ6 771 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 C9orf78Q9NZ63 289 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CARMIL3Q8ND23 1372 aa13.97□□□□□ -0.17
CDK5RAP3-204ENST00000577664 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms