RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 NPR1P16066 1061 aa19.78■□□□□ 0.76
LITAF-218ENST00000576036 YBX3P16989 372 aaKnown RBP eCLIP19.78■□□□□ 0.76
LITAF-218ENST00000576036 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
LITAF-218ENST00000576036 CTSWP56202 376 aa19.77■□□□□ 0.76
LITAF-218ENST00000576036 TTLL11Q8NHH1 800 aa19.77■□□□□ 0.76
LITAF-218ENST00000576036 CSF1RP07333 972 aa19.76■□□□□ 0.75
LITAF-218ENST00000576036 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
LITAF-218ENST00000576036 ANKRD44Q8N8A2 993 aa19.76■□□□□ 0.75
LITAF-218ENST00000576036 ZNF622Q969S3 477 aaKnown RBP eCLIP19.76■□□□□ 0.75
LITAF-218ENST00000576036 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
LITAF-218ENST00000576036 LTBP1Q14766 1721 aa19.76■□□□□ 0.75
LITAF-218ENST00000576036 SNED1Q8TER0 1413 aa19.76■□□□□ 0.75
LITAF-218ENST00000576036 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
LITAF-218ENST00000576036 FTSJ3Q8IY81 847 aaKnown RBP19.75■□□□□ 0.75
LITAF-218ENST00000576036 CCDC85AQ96PX6 553 aaPredicted RBP19.75■□□□□ 0.75
LITAF-218ENST00000576036 CRAMP1Q96RY5 1269 aa19.75■□□□□ 0.75
LITAF-218ENST00000576036 SBF1O95248 1867 aa19.75■□□□□ 0.75
LITAF-218ENST00000576036 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
LITAF-218ENST00000576036 PRPF40BQ6NWY9 871 aaKnown RBP19.74■□□□□ 0.75
LITAF-218ENST00000576036 TTLL6Q8N841 843 aa19.74■□□□□ 0.75
LITAF-218ENST00000576036 C7orf43Q8WVR3 580 aa19.74■□□□□ 0.75
LITAF-218ENST00000576036 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
LITAF-218ENST00000576036 GREM2Q9H772 168 aa19.74■□□□□ 0.75
LITAF-218ENST00000576036 SEC31BQ9NQW1 1179 aa19.74■□□□□ 0.75
LITAF-218ENST00000576036 RABL6Q3YEC7 729 aaPredicted RBP19.73■□□□□ 0.75
LITAF-218ENST00000576036 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
LITAF-218ENST00000576036 CNKSR1Q969H4 720 aa19.73■□□□□ 0.75
LITAF-218ENST00000576036 BICC1Q9H694 974 aaKnown RBP19.73■□□□□ 0.75
LITAF-218ENST00000576036 ZBTB7BO15156 539 aaPredicted RBP19.72■□□□□ 0.75
LITAF-218ENST00000576036 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 DALRD3Q5D0E6 543 aaKnown RBP19.72■□□□□ 0.75
LITAF-218ENST00000576036 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 RBM17Q96I25 401 aaKnown RBP19.72■□□□□ 0.75
LITAF-218ENST00000576036 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 COG6Q9Y2V7 657 aa19.72■□□□□ 0.75
LITAF-218ENST00000576036 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
LITAF-218ENST00000576036 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
LITAF-218ENST00000576036 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
LITAF-218ENST00000576036 MVPQ14764 893 aaKnown RBP19.71■□□□□ 0.75
LITAF-218ENST00000576036 CCDC152Q4G0S7 254 aa19.71■□□□□ 0.75
LITAF-218ENST00000576036 LMBR1LQ6UX01 489 aa19.71■□□□□ 0.75
LITAF-218ENST00000576036 LRRFIP2Q9Y608 721 aaKnown RBP19.71■□□□□ 0.75
LITAF-218ENST00000576036 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
LITAF-218ENST00000576036 GRAPQ13588 217 aa19.7■□□□□ 0.74
LITAF-218ENST00000576036 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
LITAF-218ENST00000576036 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.7■□□□□ 0.74
LITAF-218ENST00000576036 GRAPLQ8TC17 118 aaPredicted RBP19.7■□□□□ 0.74
LITAF-218ENST00000576036 CHD4Q14839 1912 aa19.69■□□□□ 0.74
LITAF-218ENST00000576036 MS4A1P11836 297 aa19.69■□□□□ 0.74
LITAF-218ENST00000576036 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
LITAF-218ENST00000576036 C21orf2O43822 256 aa19.68■□□□□ 0.74
LITAF-218ENST00000576036 GNAI3P08754 354 aa19.68■□□□□ 0.74
LITAF-218ENST00000576036 ITGA6P23229 1130 aa19.68■□□□□ 0.74
LITAF-218ENST00000576036 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
LITAF-218ENST00000576036 SUPT16HQ9Y5B9 1047 aaKnown RBP19.68■□□□□ 0.74
LITAF-218ENST00000576036 DICER1Q9UPY3 1922 aaKnown RBP19.68■□□□□ 0.74
LITAF-218ENST00000576036 PPEF1O14829 653 aaPredicted RBP19.67■□□□□ 0.74
LITAF-218ENST00000576036 ZNF219Q9P2Y4 722 aaPredicted RBP19.67■□□□□ 0.74
LITAF-218ENST00000576036 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
LITAF-218ENST00000576036 RFX5P48382 616 aaPredicted RBP19.66■□□□□ 0.74
LITAF-218ENST00000576036 GPR162Q16538 588 aa19.66■□□□□ 0.74
LITAF-218ENST00000576036 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
LITAF-218ENST00000576036 BBOX1O75936 387 aa19.65■□□□□ 0.74
LITAF-218ENST00000576036 RPS8P62241 208 aaKnown RBP19.65■□□□□ 0.74
LITAF-218ENST00000576036 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
LITAF-218ENST00000576036 NFKBIEO00221 500 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 GNAI2P04899 355 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 PRELPP51888 382 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 MTX1Q13505 466 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 ZNF594Q96JF6 807 aaPredicted RBP19.64■□□□□ 0.73
LITAF-218ENST00000576036 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
LITAF-218ENST00000576036 SP8Q8IXZ3 490 aa19.63■□□□□ 0.73
LITAF-218ENST00000576036 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
LITAF-218ENST00000576036 TIAM2Q8IVF5 1701 aa19.62■□□□□ 0.73
LITAF-218ENST00000576036 ANKRD18BA2A2Z9 1011 aa19.62■□□□□ 0.73
LITAF-218ENST00000576036 RASSF7Q02833 373 aa19.62■□□□□ 0.73
LITAF-218ENST00000576036 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
LITAF-218ENST00000576036 ANKRD18AQ8IVF6 992 aa19.62■□□□□ 0.73
LITAF-218ENST00000576036 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
LITAF-218ENST00000576036 COL4A5P29400 1685 aa19.62■□□□□ 0.73
LITAF-218ENST00000576036 PNMA6EA0A0J9YXQ4 647 aa19.61■□□□□ 0.73
LITAF-218ENST00000576036 CCDC93Q567U6 631 aa19.61■□□□□ 0.73
LITAF-218ENST00000576036 KLHDC4Q8TBB5 520 aa19.61■□□□□ 0.73
LITAF-218ENST00000576036 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
LITAF-218ENST00000576036 TMC4Q7Z404 712 aa19.6■□□□□ 0.73
LITAF-218ENST00000576036 PUS3Q9BZE2 481 aaKnown RBP19.6■□□□□ 0.73
LITAF-218ENST00000576036 BSDC1Q9NW68 430 aaPredicted RBP19.6■□□□□ 0.73
LITAF-218ENST00000576036 LTBP3Q9NS15 1303 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 GPSM2P81274 684 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 PTPN12Q05209 780 aaKnown RBP19.59■□□□□ 0.73
LITAF-218ENST00000576036 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 CEP85Q6P2H3 762 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 MINPP1Q9UNW1 487 aa19.59■□□□□ 0.73
LITAF-218ENST00000576036 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms