RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 KLRG2A4D1S0 409 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-210ENST00000574217 H0YIN7 160 aa8.4□□□□□ -1.06
PRPF8-210ENST00000574217 PCCAP05165 728 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-210ENST00000574217 NBPF7P0C2Y1 421 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-210ENST00000574217 HCLS1P14317 486 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-210ENST00000574217 YBX3P16989 372 aaKnown RBP eCLIP8.4□□□□□ -1.066e-6■□□□□ 10.6
PRPF8-210ENST00000574217 SLC10A5Q5PT55 438 aa8.4□□□□□ -1.06
PRPF8-210ENST00000574217 UBE3BQ7Z3V4 1068 aa8.4□□□□□ -1.06
PRPF8-210ENST00000574217 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-210ENST00000574217 MYH3P11055 1940 aa8.4□□□□□ -1.06
PRPF8-210ENST00000574217 TAF1P21675 1872 aa8.4□□□□□ -1.07
PRPF8-210ENST00000574217 SLX4Q8IY92 1834 aa8.4□□□□□ -1.07
PRPF8-210ENST00000574217 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 H7C1W4 665 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 IRS4O14654 1257 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-210ENST00000574217 GNAI2P04899 355 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 SRGNP10124 158 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
PRPF8-210ENST00000574217 GPR162Q16538 588 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 ERICH6BQ5W0A0 696 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.071e-18■□□□□ 9
PRPF8-210ENST00000574217 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
PRPF8-210ENST00000574217 NPR1P16066 1061 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 CASP7P55210 303 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 CRY2Q49AN0 593 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 STYK1Q6J9G0 422 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 MASTLQ96GX5 879 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 SUCLG2Q96I99 432 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 C1orf115Q9H7X2 142 aa8.38□□□□□ -1.07
PRPF8-210ENST00000574217 LRRFIP2Q9Y608 721 aaKnown RBP8.38□□□□□ -1.07
PRPF8-210ENST00000574217 PDE8AO60658 829 aa8.37□□□□□ -1.07
PRPF8-210ENST00000574217 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
PRPF8-210ENST00000574217 TTLL6Q8N841 843 aa8.37□□□□□ -1.07
PRPF8-210ENST00000574217 RPGRQ92834 1020 aaKnown RBP8.37□□□□□ -1.07
PRPF8-210ENST00000574217 CNKSR1Q969H4 720 aa8.37□□□□□ -1.07
PRPF8-210ENST00000574217 PLA2G12BQ9BX93 195 aa8.37□□□□□ -1.07
PRPF8-210ENST00000574217 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
PRPF8-210ENST00000574217 ZNF219Q9P2Y4 722 aaPredicted RBP8.37□□□□□ -1.07
PRPF8-210ENST00000574217 COL4A1P02462 1669 aa8.37□□□□□ -1.07
PRPF8-210ENST00000574217 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 CTSWP56202 376 aa8.36□□□□□ -1.07
PRPF8-210ENST00000574217 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 CEP85Q6P2H3 762 aa8.36□□□□□ -1.07
PRPF8-210ENST00000574217 RPAP2Q8IXW5 612 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 RBM17Q96I25 401 aaKnown RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 KAZALD1Q96I82 304 aa8.36□□□□□ -1.07
PRPF8-210ENST00000574217 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-210ENST00000574217 SPEF2Q9C093 1822 aa8.36□□□□□ -1.07
PRPF8-210ENST00000574217 CHD4Q14839 1912 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 FER1L6Q2WGJ9 1857 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 CCDC88AQ3V6T2 1871 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 C21orf2O43822 256 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 GRIN3BO60391 1043 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 HMMRO75330 724 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 FOXO4P98177 505 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 MTX1Q13505 466 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 RABL6Q3YEC7 729 aaPredicted RBP8.35□□□□□ -1.07
PRPF8-210ENST00000574217 EPHA10Q5JZY3 1008 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
PRPF8-210ENST00000574217 SBF1O95248 1867 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 PNMA6EA0A0J9YXQ4 647 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 SRGAP3O43295 1099 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 CSF1RP07333 972 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 GRAPQ13588 217 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 OLFM4Q6UX06 510 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 DDX46Q7L014 1031 aaKnown RBP8.34□□□□□ -1.07
PRPF8-210ENST00000574217 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 GRAPLQ8TC17 118 aaPredicted RBP8.34□□□□□ -1.07
PRPF8-210ENST00000574217 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 CELF1Q92879 486 aaKnown RBP8.34□□□□□ -1.07
PRPF8-210ENST00000574217 CCDC136Q96JN2 1154 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 PPP4R2Q9NY27 417 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
PRPF8-210ENST00000574217 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-210ENST00000574217 RASSF7Q02833 373 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 IFIT5Q13325 482 aaKnown RBP8.33□□□□□ -1.08
PRPF8-210ENST00000574217 HDAC1Q13547 482 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-210ENST00000574217 CCDC57Q2TAC2 916 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 SIRT2Q8IXJ6 389 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 SSH3Q8TE77 659 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 RWDD1Q9H446 243 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-210ENST00000574217 GREM2Q9H772 168 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 RTL9Q8NET4 1388 aa8.33□□□□□ -1.08
PRPF8-210ENST00000574217 ANKRD18BA2A2Z9 1011 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms