RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 CWC25Q9NXE8 425 aaPredicted RBP38.97■■■■□ 3.83
CTDNEP1-206ENST00000571409 PI4KAP2A4QPH2 592 aa38.96■■■■□ 3.83
CTDNEP1-206ENST00000571409 SLC4A2P04920 1241 aa38.96■■■■□ 3.83
CTDNEP1-206ENST00000571409 DPP8Q6V1X1 898 aaPredicted RBP38.96■■■■□ 3.83
CTDNEP1-206ENST00000571409 PI4KAP1Q8N8J0 262 aa38.96■■■■□ 3.83
CTDNEP1-206ENST00000571409 PPIP5K2O43314 1243 aa38.95■■■■□ 3.83
CTDNEP1-206ENST00000571409 EIF6P56537 245 aaKnown RBP38.95■■■■□ 3.83
CTDNEP1-206ENST00000571409 G2E3Q7L622 706 aa38.95■■■■□ 3.83
CTDNEP1-206ENST00000571409 MPNDQ8N594 471 aa38.95■■■■□ 3.83
CTDNEP1-206ENST00000571409 SUPT20HQ8NEM7 779 aa38.95■■■■□ 3.83
CTDNEP1-206ENST00000571409 PCCAP05165 728 aaPredicted RBP38.94■■■■□ 3.82
CTDNEP1-206ENST00000571409 AOC3Q16853 763 aa38.94■■■■□ 3.82
CTDNEP1-206ENST00000571409 TMC4Q7Z404 712 aa38.94■■■■□ 3.82
CTDNEP1-206ENST00000571409 RTFDC1Q9BY42 306 aaPredicted RBP38.94■■■■□ 3.82
CTDNEP1-206ENST00000571409 LRRC37AA6NMS7 1700 aa38.93■■■■□ 3.82
CTDNEP1-206ENST00000571409 NIM1KQ8IY84 436 aa38.93■■■■□ 3.82
CTDNEP1-206ENST00000571409 GPC2Q8N158 579 aa38.93■■■■□ 3.82
CTDNEP1-206ENST00000571409 CELF1Q92879 486 aaKnown RBP38.93■■■■□ 3.82
CTDNEP1-206ENST00000571409 SPINK5Q9NQ38 1064 aaPredicted RBP38.93■■■■□ 3.82
CTDNEP1-206ENST00000571409 POTEIP0CG38 1075 aa38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 POTEJP0CG39 1038 aa38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 HSP90B1P14625 803 aaKnown RBP38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 EXOSC9Q06265 439 aaKnown RBP38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 VPS33BQ9H267 617 aa38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 TAF1DQ9H5J8 278 aaPredicted RBP38.92■■■■□ 3.82
CTDNEP1-206ENST00000571409 HTRA3P83110 453 aa38.91■■■■□ 3.82
CTDNEP1-206ENST00000571409 JARID2Q92833 1246 aaPredicted RBP38.91■■■■□ 3.82
CTDNEP1-206ENST00000571409 COL4A1P02462 1669 aa38.9■■■■□ 3.82
CTDNEP1-206ENST00000571409 VAMP4O75379 141 aa38.9■■■■□ 3.82
CTDNEP1-206ENST00000571409 HACL1Q9UJ83 578 aa38.9■■■■□ 3.82
CTDNEP1-206ENST00000571409 IGKV5-2P06315 115 aa38.89■■■■□ 3.82
CTDNEP1-206ENST00000571409 NEXNQ0ZGT2 675 aa38.89■■■■□ 3.82
CTDNEP1-206ENST00000571409 GJA3Q9Y6H8 435 aa38.89■■■■□ 3.82
CTDNEP1-206ENST00000571409 CHADLQ6NUI6 762 aa38.88■■■■□ 3.81
CTDNEP1-206ENST00000571409 MYH16Q9H6N6 1097 aa38.88■■■■□ 3.81
CTDNEP1-206ENST00000571409 PDE8AO60658 829 aa38.87■■■■□ 3.81
CTDNEP1-206ENST00000571409 FLIIQ13045 1269 aa38.87■■■■□ 3.81
CTDNEP1-206ENST00000571409 DNAJC5GQ8N7S2 189 aa38.87■■■■□ 3.81
CTDNEP1-206ENST00000571409 DUOX1Q9NRD9 1551 aa38.86■■■■□ 3.81
CTDNEP1-206ENST00000571409 CACNA1FO60840 1977 aa38.85■■■■□ 3.81
CTDNEP1-206ENST00000571409 EPHX2P34913 555 aa38.85■■■■□ 3.81
CTDNEP1-206ENST00000571409 KIAA2012Q0VF49 1180 aa38.84■■■■□ 3.81
CTDNEP1-206ENST00000571409 CWF19L2Q2TBE0 894 aaKnown RBP38.84■■■■□ 3.81
CTDNEP1-206ENST00000571409 LDHDQ86WU2 507 aa38.84■■■■□ 3.81
CTDNEP1-206ENST00000571409 CDHR2Q9BYE9 1310 aa38.84■■■■□ 3.81
CTDNEP1-206ENST00000571409 RPS8P62241 208 aaKnown RBP38.83■■■■□ 3.81
CTDNEP1-206ENST00000571409 CCDC152Q4G0S7 254 aa38.83■■■■□ 3.81
CTDNEP1-206ENST00000571409 EAPPQ56P03 285 aaPredicted RBP38.83■■■■□ 3.81
CTDNEP1-206ENST00000571409 SEC31BQ9NQW1 1179 aa38.83■■■■□ 3.81
CTDNEP1-206ENST00000571409 NEURL1BA8MQ27 555 aa38.82■■■■□ 3.8
CTDNEP1-206ENST00000571409 FKBP5Q13451 457 aaPredicted RBP38.82■■■■□ 3.8
CTDNEP1-206ENST00000571409 ZNRF3Q9ULT6 936 aa38.82■■■■□ 3.8
CTDNEP1-206ENST00000571409 NSFL1CQ9UNZ2 370 aaKnown RBP38.81■■■■□ 3.8
CTDNEP1-206ENST00000571409 CCDC85AQ96PX6 553 aaPredicted RBP38.8■■■■□ 3.8
CTDNEP1-206ENST00000571409 LTBP1Q14766 1721 aa38.79■■■■□ 3.8
CTDNEP1-206ENST00000571409 ZNF521Q96K83 1311 aa38.79■■■■□ 3.8
CTDNEP1-206ENST00000571409 ADAMTSL1Q8N6G6 1762 aa38.78■■■■□ 3.8
CTDNEP1-206ENST00000571409 LMOD1P29536 600 aaPredicted RBP38.78■■■■□ 3.8
CTDNEP1-206ENST00000571409 GPSM2P81274 684 aa38.78■■■■□ 3.8
CTDNEP1-206ENST00000571409 PNMA8AQ86V59 439 aaPredicted RBP38.78■■■■□ 3.8
CTDNEP1-206ENST00000571409 SCNN1DP51172 638 aa38.77■■■■□ 3.8
CTDNEP1-206ENST00000571409 DNAAF4Q8WXU2 420 aa38.77■■■■□ 3.8
CTDNEP1-206ENST00000571409 CLEC11AQ9Y240 323 aa38.77■■■■□ 3.8
CTDNEP1-206ENST00000571409 CXCL9Q07325 125 aa38.76■■■■□ 3.8
CTDNEP1-206ENST00000571409 CTSWP56202 376 aa38.75■■■■□ 3.79
CTDNEP1-206ENST00000571409 KLRG1Q96E93 195 aa38.75■■■■□ 3.79
CTDNEP1-206ENST00000571409 MYH3P11055 1940 aa38.75■■■■□ 3.79
CTDNEP1-206ENST00000571409 C6orf229H3BNL8 230 aa38.74■■■■□ 3.79
CTDNEP1-206ENST00000571409 WASHC4Q2M389 1173 aa38.74■■■■□ 3.79
CTDNEP1-206ENST00000571409 POLLQ9UGP5 575 aa38.74■■■■□ 3.79
CTDNEP1-206ENST00000571409 UBE3BQ7Z3V4 1068 aa38.73■■■■□ 3.79
CTDNEP1-206ENST00000571409 H7C1W4 665 aa38.72■■■■□ 3.79
CTDNEP1-206ENST00000571409 EPS15P42566 896 aa38.72■■■■□ 3.79
CTDNEP1-206ENST00000571409 GCKRQ14397 625 aa38.72■■■■□ 3.79
CTDNEP1-206ENST00000571409 CIAPIN1Q6FI81 312 aa38.71■■■■□ 3.79
CTDNEP1-206ENST00000571409 RAD17O75943 681 aa38.7■■■■□ 3.79
CTDNEP1-206ENST00000571409 ANKRD18AQ8IVF6 992 aa38.7■■■■□ 3.79
CTDNEP1-206ENST00000571409 LINS1Q8NG48 757 aa38.7■■■■□ 3.79
CTDNEP1-206ENST00000571409 TTLL11Q8NHH1 800 aa38.7■■■■□ 3.79
CTDNEP1-206ENST00000571409 YDJCA8MPS7 323 aa38.69■■■■□ 3.78
CTDNEP1-206ENST00000571409 RIMBP2O15034 1052 aa38.69■■■■□ 3.78
CTDNEP1-206ENST00000571409 TBC1D16Q8TBP0 767 aa38.69■■■■□ 3.78
CTDNEP1-206ENST00000571409 EYA3Q99504 573 aa38.69■■■■□ 3.78
CTDNEP1-206ENST00000571409 PODXL2Q9NZ53 605 aa38.68■■■■□ 3.78
CTDNEP1-206ENST00000571409 ANKIB1Q9P2G1 1089 aa38.68■■■■□ 3.78
CTDNEP1-206ENST00000571409 PASKQ96RG2 1323 aa38.67■■■■□ 3.78
CTDNEP1-206ENST00000571409 TNIP1Q15025 636 aa38.67■■■■□ 3.78
CTDNEP1-206ENST00000571409 GPR101Q96P66 508 aaPredicted RBP38.67■■■■□ 3.78
CTDNEP1-206ENST00000571409 CDC5LQ99459 802 aaKnown RBP38.67■■■■□ 3.78
CTDNEP1-206ENST00000571409 GPRC5DQ9NZD1 345 aa38.67■■■■□ 3.78
CTDNEP1-206ENST00000571409 F6X3S4 739 aa38.66■■■■□ 3.78
CTDNEP1-206ENST00000571409 ITGBL1O95965 494 aaPredicted RBP38.66■■■■□ 3.78
CTDNEP1-206ENST00000571409 GREM2Q9H772 168 aa38.66■■■■□ 3.78
CTDNEP1-206ENST00000571409 DBNDD1Q9H9R9 158 aa38.66■■■■□ 3.78
CTDNEP1-206ENST00000571409 GMPSP49915 693 aaPredicted RBP38.65■■■■□ 3.78
CTDNEP1-206ENST00000571409 MAP1SQ66K74 1059 aaPredicted RBP38.65■■■■□ 3.78
CTDNEP1-206ENST00000571409 SPEF2Q9C093 1822 aa38.64■■■■□ 3.78
CTDNEP1-206ENST00000571409 UFL1O94874 794 aa38.64■■■■□ 3.78
CTDNEP1-206ENST00000571409 USP50Q70EL3 339 aaPredicted RBP38.64■■■■□ 3.78
CTDNEP1-206ENST00000571409 CREBZFQ9NS37 354 aa38.64■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms