RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 MYD88Q99836 296 aa11.5□□□□□ -0.57
NPLOC4-204ENST00000570324 LAMB2P55268 1798 aa11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 ZNRF3Q9ULT6 936 aa11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
NPLOC4-204ENST00000570324 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 SF3B3Q15393 1217 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 WWC1Q8IX03 1113 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 JMYQ8N9B5 988 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 ZBTB38Q8NAP3 1195 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 NSFL1CQ9UNZ2 370 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-204ENST00000570324 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 TNIP1Q15025 636 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 CIAPIN1Q6FI81 312 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 MAP3K2Q9Y2U5 619 aa11.47□□□□□ -0.57
NPLOC4-204ENST00000570324 DDX60Q8IY21 1712 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 TMEM88BA6NKF7 163 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 G3V3G9 751 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 KIAA2012Q0VF49 1180 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 TSPYL6Q8N831 410 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 CELF1Q92879 486 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 EYA3Q99504 573 aa11.46□□□□□ -0.57
NPLOC4-204ENST00000570324 TAF1P21675 1872 aa11.46□□□□□ -0.58
NPLOC4-204ENST00000570324 IL16Q14005 1332 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 PI4KAP2A4QPH2 592 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 PDE8AO60658 829 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 RAD17O75943 681 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 EPS15P42566 896 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 SCNN1DP51172 638 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 CXCL9Q07325 125 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 KSR2Q6VAB6 950 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 PI4KAP1Q8N8J0 262 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 COL4A5P29400 1685 aa11.45□□□□□ -0.58
NPLOC4-204ENST00000570324 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 ZC3H12CQ9C0D7 883 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 ADARB2Q9NS39 739 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 ANKIB1Q9P2G1 1089 aa11.44□□□□□ -0.58
NPLOC4-204ENST00000570324 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 GMPSP49915 693 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 GPSM2P81274 684 aa11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 WDR63Q8IWG1 891 aa11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-204ENST00000570324 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
NPLOC4-204ENST00000570324 H7C1D1 291 aa11.42□□□□□ -0.58
NPLOC4-204ENST00000570324 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-204ENST00000570324 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-204ENST00000570324 DBNDD1Q9H9R9 158 aa11.42□□□□□ -0.58
NPLOC4-204ENST00000570324 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 ECE2O60344 883 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 UFL1O94874 794 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 FLIIQ13045 1269 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 CWF19L2Q2TBE0 894 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 DEFB115Q30KQ5 88 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 TBC1D16Q8TBP0 767 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 AIDAQ96BJ3 306 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 CDC5LQ99459 802 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 CNOT7Q9UIV1 285 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 ADAMTSL1Q8N6G6 1762 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
NPLOC4-204ENST00000570324 LRRC37AA6NMS7 1700 aa11.4□□□□□ -0.58
NPLOC4-204ENST00000570324 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
NPLOC4-204ENST00000570324 IGKV5-2P06315 115 aa11.4□□□□□ -0.58
NPLOC4-204ENST00000570324 CTSWP56202 376 aa11.4□□□□□ -0.58
NPLOC4-204ENST00000570324 EXOSC9Q06265 439 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms