RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 ZNRF3Q9ULT6 936 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 DDX60Q8IY21 1712 aaKnown RBP17.03■□□□□ 0.32
SPG7-221ENST00000569720 EPS15P42566 896 aa17.02■□□□□ 0.32
SPG7-221ENST00000569720 GNAI1P63096 354 aa17.02■□□□□ 0.32
SPG7-221ENST00000569720 MBIPQ9NS73 344 aa17.02■□□□□ 0.32
SPG7-221ENST00000569720 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
SPG7-221ENST00000569720 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
SPG7-221ENST00000569720 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
SPG7-221ENST00000569720 APAF1O14727 1248 aa17■□□□□ 0.31
SPG7-221ENST00000569720 VEGFBP49765 207 aa17■□□□□ 0.31
SPG7-221ENST00000569720 CXCL9Q07325 125 aa17■□□□□ 0.31
SPG7-221ENST00000569720 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
SPG7-221ENST00000569720 DEFB115Q30KQ5 88 aa17■□□□□ 0.31
SPG7-221ENST00000569720 AIDAQ96BJ3 306 aa17■□□□□ 0.31
SPG7-221ENST00000569720 FAM89AQ96GI7 184 aa17■□□□□ 0.31
SPG7-221ENST00000569720 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
SPG7-221ENST00000569720 CHMP4AQ9BY43 222 aa17■□□□□ 0.31
SPG7-221ENST00000569720 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
SPG7-221ENST00000569720 LRRC37AA6NMS7 1700 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 TNIP1Q15025 636 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
SPG7-221ENST00000569720 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
SPG7-221ENST00000569720 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
SPG7-221ENST00000569720 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
SPG7-221ENST00000569720 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
SPG7-221ENST00000569720 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
SPG7-221ENST00000569720 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
SPG7-221ENST00000569720 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
SPG7-221ENST00000569720 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
SPG7-221ENST00000569720 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
SPG7-221ENST00000569720 IRS4O14654 1257 aaPredicted RBP16.96■□□□□ 0.31
SPG7-221ENST00000569720 RAD17O75943 681 aa16.96■□□□□ 0.31
SPG7-221ENST00000569720 GMPSP49915 693 aaPredicted RBP16.96■□□□□ 0.31
SPG7-221ENST00000569720 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.31
SPG7-221ENST00000569720 FOXN1O15353 648 aa16.95■□□□□ 0.3
SPG7-221ENST00000569720 CAPN15O75808 1086 aa16.95■□□□□ 0.3
SPG7-221ENST00000569720 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
SPG7-221ENST00000569720 CELF1Q92879 486 aaKnown RBP16.95■□□□□ 0.3
SPG7-221ENST00000569720 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
SPG7-221ENST00000569720 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SPG7-221ENST00000569720 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
SPG7-221ENST00000569720 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
SPG7-221ENST00000569720 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
SPG7-221ENST00000569720 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
SPG7-221ENST00000569720 EYA3Q99504 573 aa16.94■□□□□ 0.3
SPG7-221ENST00000569720 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
SPG7-221ENST00000569720 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
SPG7-221ENST00000569720 ECE1P42892 770 aa16.93■□□□□ 0.3
SPG7-221ENST00000569720 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
SPG7-221ENST00000569720 MAP2K1Q02750 393 aaPredicted RBP16.93■□□□□ 0.3
SPG7-221ENST00000569720 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
SPG7-221ENST00000569720 MYD88Q99836 296 aa16.93■□□□□ 0.3
SPG7-221ENST00000569720 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
SPG7-221ENST00000569720 WBP1LQ9NX94 342 aa16.93■□□□□ 0.3
SPG7-221ENST00000569720 H7C1D1 291 aa16.92■□□□□ 0.3
SPG7-221ENST00000569720 TRAF5O00463 557 aa16.92■□□□□ 0.3
SPG7-221ENST00000569720 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
SPG7-221ENST00000569720 CCDC191Q8NCU4 936 aa16.92■□□□□ 0.3
SPG7-221ENST00000569720 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
SPG7-221ENST00000569720 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
SPG7-221ENST00000569720 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
SPG7-221ENST00000569720 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
SPG7-221ENST00000569720 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
SPG7-221ENST00000569720 GPSM2P81274 684 aa16.91■□□□□ 0.3
SPG7-221ENST00000569720 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPG7-221ENST00000569720 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
SPG7-221ENST00000569720 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 CAPNS2Q96L46 248 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
SPG7-221ENST00000569720 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 TLL2Q9Y6L7 1015 aa16.9■□□□□ 0.3
SPG7-221ENST00000569720 G3V3G9 751 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 PSMD14O00487 310 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 PDE8AO60658 829 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 CELF2O95319 508 aaKnown RBP16.89■□□□□ 0.29
SPG7-221ENST00000569720 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 CST9Q5W186 159 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 MICALL2Q8IY33 904 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 DPF2Q92785 391 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 ZC3H12CQ9C0D7 883 aaKnown RBP16.89■□□□□ 0.29
SPG7-221ENST00000569720 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.29
SPG7-221ENST00000569720 ECE2O60344 883 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
SPG7-221ENST00000569720 GRM1Q13255 1194 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 GLIS2Q9BZE0 524 aaPredicted RBP16.88■□□□□ 0.29
SPG7-221ENST00000569720 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms