RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 RTFDC1Q9BY42 306 aaPredicted RBP21.3■■□□□ 1
EDC3-216ENST00000569561 RRAGCQ9HB90 399 aa21.3■■□□□ 1
EDC3-216ENST00000569561 CACNA1FO60840 1977 aa21.29■■□□□ 1
EDC3-216ENST00000569561 FZD9O00144 591 aa21.29■■□□□ 1
EDC3-216ENST00000569561 TOMM70O94826 608 aa21.29■■□□□ 1
EDC3-216ENST00000569561 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
EDC3-216ENST00000569561 TRMT2AQ8IZ69 625 aaKnown RBP21.29■■□□□ 1
EDC3-216ENST00000569561 DNAAF4Q8WXU2 420 aa21.29■■□□□ 1
EDC3-216ENST00000569561 JARID2Q92833 1246 aaPredicted RBP21.29■■□□□ 1
EDC3-216ENST00000569561 CELF1Q92879 486 aaKnown RBP21.29■■□□□ 1
EDC3-216ENST00000569561 DUOX1Q9NRD9 1551 aa21.28■■□□□ 1
EDC3-216ENST00000569561 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
EDC3-216ENST00000569561 MIER1Q8N108 512 aa21.28■■□□□ 1
EDC3-216ENST00000569561 ZNF541Q9H0D2 1346 aa21.28■■□□□ 1
EDC3-216ENST00000569561 H7C1W4 665 aa21.27■■□□□ 1
EDC3-216ENST00000569561 PDE8AO60658 829 aa21.27■■□□□ 1
EDC3-216ENST00000569561 CASP7P55210 303 aa21.27■■□□□ 1
EDC3-216ENST00000569561 NEXNQ0ZGT2 675 aa21.27■■□□□ 1
EDC3-216ENST00000569561 TMC4Q7Z404 712 aa21.27■■□□□ 1
EDC3-216ENST00000569561 CDCA7LQ96GN5 454 aa21.27■■□□□ 1
EDC3-216ENST00000569561 TAF1P21675 1872 aa21.26■□□□□ 0.99
EDC3-216ENST00000569561 DDNO94850 711 aaPredicted RBP21.26■□□□□ 0.99
EDC3-216ENST00000569561 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
EDC3-216ENST00000569561 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
EDC3-216ENST00000569561 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
EDC3-216ENST00000569561 RBM46Q8TBY0 533 aaKnown RBP21.26■□□□□ 0.99
EDC3-216ENST00000569561 L3MBTL3Q96JM7 780 aaPredicted RBP21.26■□□□□ 0.99
EDC3-216ENST00000569561 VEGFAP15692 232 aaPredicted RBP21.25■□□□□ 0.99
EDC3-216ENST00000569561 GCKRQ14397 625 aa21.25■□□□□ 0.99
EDC3-216ENST00000569561 SEC31BQ9NQW1 1179 aa21.25■□□□□ 0.99
EDC3-216ENST00000569561 LTBP1Q14766 1721 aa21.24■□□□□ 0.99
EDC3-216ENST00000569561 F6X3S4 739 aa21.24■□□□□ 0.99
EDC3-216ENST00000569561 BEND3Q5T5X7 828 aa21.24■□□□□ 0.99
EDC3-216ENST00000569561 PLA2G12BQ9BX93 195 aa21.24■□□□□ 0.99
EDC3-216ENST00000569561 VPS33BQ9H267 617 aa21.24■□□□□ 0.99
EDC3-216ENST00000569561 CTSWP56202 376 aa21.23■□□□□ 0.99
EDC3-216ENST00000569561 CCDC152Q4G0S7 254 aa21.23■□□□□ 0.99
EDC3-216ENST00000569561 MPNDQ8N594 471 aa21.23■□□□□ 0.99
EDC3-216ENST00000569561 MRPL50Q8N5N7 158 aaKnown RBP21.23■□□□□ 0.99
EDC3-216ENST00000569561 RTL9Q8NET4 1388 aa21.23■□□□□ 0.99
EDC3-216ENST00000569561 RPS8P62241 208 aaKnown RBP21.22■□□□□ 0.99
EDC3-216ENST00000569561 DPP8Q6V1X1 898 aaPredicted RBP21.22■□□□□ 0.99
EDC3-216ENST00000569561 TTLL11Q8NHH1 800 aa21.22■□□□□ 0.99
EDC3-216ENST00000569561 HSPA6P17066 643 aa21.21■□□□□ 0.99
EDC3-216ENST00000569561 AOC3Q16853 763 aa21.21■□□□□ 0.99
EDC3-216ENST00000569561 UBE3BQ7Z3V4 1068 aa21.21■□□□□ 0.99
EDC3-216ENST00000569561 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
EDC3-216ENST00000569561 SUPT20HQ8NEM7 779 aa21.21■□□□□ 0.99
EDC3-216ENST00000569561 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
EDC3-216ENST00000569561 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
EDC3-216ENST00000569561 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
EDC3-216ENST00000569561 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.98
EDC3-216ENST00000569561 GPSM2P81274 684 aa21.19■□□□□ 0.98
EDC3-216ENST00000569561 FSTL1Q12841 308 aa21.19■□□□□ 0.98
EDC3-216ENST00000569561 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
EDC3-216ENST00000569561 CCDC85AQ96PX6 553 aaPredicted RBP21.19■□□□□ 0.98
EDC3-216ENST00000569561 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
EDC3-216ENST00000569561 GPC2Q8N158 579 aa21.18■□□□□ 0.98
EDC3-216ENST00000569561 GREM2Q9H772 168 aa21.18■□□□□ 0.98
EDC3-216ENST00000569561 PODXL2Q9NZ53 605 aa21.18■□□□□ 0.98
EDC3-216ENST00000569561 POLLQ9UGP5 575 aa21.18■□□□□ 0.98
EDC3-216ENST00000569561 CSF1RP07333 972 aa21.17■□□□□ 0.98
EDC3-216ENST00000569561 NIM1KQ8IY84 436 aa21.17■□□□□ 0.98
EDC3-216ENST00000569561 TAF1DQ9H5J8 278 aaPredicted RBP21.16■□□□□ 0.98
EDC3-216ENST00000569561 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 ALDH1L1O75891 902 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 CT47B1P0C2W7 299 aaPredicted RBP21.15■□□□□ 0.98
EDC3-216ENST00000569561 EIF6P56537 245 aaKnown RBP21.15■□□□□ 0.98
EDC3-216ENST00000569561 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 SMC1BQ8NDV3 1235 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 ZNRF3Q9ULT6 936 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
EDC3-216ENST00000569561 MYH3P11055 1940 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 SCN4AP35499 1836 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
EDC3-216ENST00000569561 PTPRCP08575 1304 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 YDJCA8MPS7 323 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 POTEIP0CG38 1075 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 POTEJP0CG39 1038 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 FOXO4P98177 505 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 TBC1D16Q8TBP0 767 aa21.14■□□□□ 0.97
EDC3-216ENST00000569561 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
EDC3-216ENST00000569561 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 GRM8O00222 908 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 SCNN1DP51172 638 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 CXCL9Q07325 125 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
EDC3-216ENST00000569561 UTYO14607 1347 aa21.12■□□□□ 0.97
EDC3-216ENST00000569561 BRPF1P55201 1214 aaPredicted RBP21.12■□□□□ 0.97
EDC3-216ENST00000569561 EPHA10Q5JZY3 1008 aa21.12■□□□□ 0.97
EDC3-216ENST00000569561 SRCIN1Q9C0H9 1055 aa21.12■□□□□ 0.97
EDC3-216ENST00000569561 BSDC1Q9NW68 430 aaPredicted RBP21.12■□□□□ 0.97
EDC3-216ENST00000569561 HACL1Q9UJ83 578 aa21.12■□□□□ 0.97
EDC3-216ENST00000569561 ITGA6P23229 1130 aa21.11■□□□□ 0.97
EDC3-216ENST00000569561 WASHC4Q2M389 1173 aa21.11■□□□□ 0.97
EDC3-216ENST00000569561 GPR101Q96P66 508 aaPredicted RBP21.11■□□□□ 0.97
EDC3-216ENST00000569561 EPHX2P34913 555 aa21.1■□□□□ 0.97
EDC3-216ENST00000569561 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms