RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 E9PSI1 815 aa18.44■□□□□ 0.54
COMMD4-225ENST00000569245 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-225ENST00000569245 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
COMMD4-225ENST00000569245 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
COMMD4-225ENST00000569245 DPP8Q6V1X1 898 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-225ENST00000569245 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
COMMD4-225ENST00000569245 SLFN5Q08AF3 891 aa18.43■□□□□ 0.54
COMMD4-225ENST00000569245 TMC4Q7Z404 712 aa18.43■□□□□ 0.54
COMMD4-225ENST00000569245 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
COMMD4-225ENST00000569245 MPNDQ8N594 471 aa18.43■□□□□ 0.54
COMMD4-225ENST00000569245 DNAAF4Q8WXU2 420 aa18.43■□□□□ 0.54
COMMD4-225ENST00000569245 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
COMMD4-225ENST00000569245 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
COMMD4-225ENST00000569245 PDE8AO60658 829 aa18.42■□□□□ 0.54
COMMD4-225ENST00000569245 CCDC152Q4G0S7 254 aa18.42■□□□□ 0.54
COMMD4-225ENST00000569245 SUPT20HQ8NEM7 779 aa18.42■□□□□ 0.54
COMMD4-225ENST00000569245 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
COMMD4-225ENST00000569245 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
COMMD4-225ENST00000569245 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-225ENST00000569245 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
COMMD4-225ENST00000569245 TIAM2Q8IVF5 1701 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 CCDC88AQ3V6T2 1871 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 FZD9O00144 591 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 HSPA6P17066 643 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 EIF6P56537 245 aaKnown RBP18.4■□□□□ 0.54
COMMD4-225ENST00000569245 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
COMMD4-225ENST00000569245 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
COMMD4-225ENST00000569245 F6X3S4 739 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 GCKRQ14397 625 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 AOC3Q16853 763 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 LINS1Q8NG48 757 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
COMMD4-225ENST00000569245 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
COMMD4-225ENST00000569245 IQCA1LA6NCM1 817 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 POTECB2RU33 542 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 FSTL1Q12841 308 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 SMC1BQ8NDV3 1235 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-225ENST00000569245 VPS33BQ9H267 617 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 GJA3Q9Y6H8 435 aa18.38■□□□□ 0.53
COMMD4-225ENST00000569245 H7C1W4 665 aa18.37■□□□□ 0.53
COMMD4-225ENST00000569245 CTSWP56202 376 aa18.37■□□□□ 0.53
COMMD4-225ENST00000569245 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 LAMB2P55268 1798 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 DDX60Q8IY21 1712 aaKnown RBP18.36■□□□□ 0.53
COMMD4-225ENST00000569245 GPC2Q8N158 579 aa18.36■□□□□ 0.53
COMMD4-225ENST00000569245 GPSM2P81274 684 aa18.35■□□□□ 0.53
COMMD4-225ENST00000569245 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
COMMD4-225ENST00000569245 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-225ENST00000569245 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
COMMD4-225ENST00000569245 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
COMMD4-225ENST00000569245 DICER1Q9UPY3 1922 aaKnown RBP18.35■□□□□ 0.53
COMMD4-225ENST00000569245 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
COMMD4-225ENST00000569245 WASHC4Q2M389 1173 aa18.34■□□□□ 0.53
COMMD4-225ENST00000569245 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
COMMD4-225ENST00000569245 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
COMMD4-225ENST00000569245 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
COMMD4-225ENST00000569245 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
COMMD4-225ENST00000569245 APLP1P51693 650 aa18.33■□□□□ 0.52
COMMD4-225ENST00000569245 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-225ENST00000569245 EYA3Q99504 573 aa18.33■□□□□ 0.52
COMMD4-225ENST00000569245 TAF1DQ9H5J8 278 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-225ENST00000569245 GREM2Q9H772 168 aa18.33■□□□□ 0.52
COMMD4-225ENST00000569245 WDR90Q96KV7 1748 aa18.32■□□□□ 0.52
COMMD4-225ENST00000569245 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-225ENST00000569245 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
COMMD4-225ENST00000569245 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
COMMD4-225ENST00000569245 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
COMMD4-225ENST00000569245 COL4A5P29400 1685 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 EPHX2P34913 555 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 C9orf78Q9NZ63 289 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-225ENST00000569245 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 TAF1P21675 1872 aa18.31■□□□□ 0.52
COMMD4-225ENST00000569245 G3V3G9 751 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 RAD17O75943 681 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 UFL1O94874 794 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 IGHMBP2P38935 993 aaKnown RBP18.3■□□□□ 0.52
COMMD4-225ENST00000569245 CASP7P55210 303 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 CXCL9Q07325 125 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 DCAF8Q5TAQ9 597 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 GPR101Q96P66 508 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-225ENST00000569245 PLA2G12BQ9BX93 195 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
COMMD4-225ENST00000569245 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
COMMD4-225ENST00000569245 GRM8O00222 908 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 POTEJP0CG39 1038 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms