RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SNCBQ16143 134 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 PDCD2Q16342 344 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 KIAA0753Q2KHM9 967 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 CIB2O75838 187 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 ZNF75DP51815 510 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 TMEM57Q8N5G2 664 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 ATP2A1O14983 1001 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 RBSNQ9H1K0 784 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 SLC20A2Q08357 652 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-216ENST00000569240 BRAPQ7Z569 592 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-216ENST00000569240 EVI5LQ96CN4 794 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 DNAI2Q9GZS0 605 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 AOX1Q06278 1338 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 NUP160Q12769 1436 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 PTGS1P23219 599 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 ARID4AP29374 1257 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-216ENST00000569240 PAK2Q13177 524 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 TERF2Q15554 542 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 CEP104O60308 925 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 HIP1RO75146 1068 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 GJB2P29033 226 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 SEPT2Q15019 361 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 CAMK4Q16566 473 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 LRRC23Q53EV4 343 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-216ENST00000569240 ARHGAP18Q8N392 663 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 GBP5Q96PP8 586 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC151A5D8V7 595 aa8.09□□□□□ -1.11
CNOT1-216ENST00000569240 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-216ENST00000569240 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.12
CNOT1-216ENST00000569240 TAOK1Q7L7X3 1001 aa8.09□□□□□ -1.12
CNOT1-216ENST00000569240 TMTC1Q8IUR5 882 aa8.09□□□□□ -1.12
CNOT1-216ENST00000569240 RNF10Q8N5U6 811 aaKnown RBP8.09□□□□□ -1.12
CNOT1-216ENST00000569240 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.12
CNOT1-216ENST00000569240 CASQ2O14958 399 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-216ENST00000569240 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 CKAP2LQ8IYA6 745 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 GTF3C6Q969F1 213 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 Q9H521 79 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 GOLGA6BA6NDN3 693 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 RAB11FIP4Q86YS3 637 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC26Q8TAB7 109 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 TTC41PQ6P2S7 1318 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 SATB1Q01826 763 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 CETN1Q12798 172 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 FAM114A2Q9NRY5 505 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 MYL5Q02045 173 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 RNASELQ05823 741 aaKnown RBP8.08□□□□□ -1.12
CNOT1-216ENST00000569240 TRPC3Q13507 836 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC178Q5BJE1 867 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 ZFYVE27Q5T4F4 411 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
CNOT1-216ENST00000569240 MPNDQ8N594 471 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 ANAPC4Q9UJX5 808 aa8.08□□□□□ -1.12
CNOT1-216ENST00000569240 TRIM6Q9C030 488 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-216ENST00000569240 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 PIK3C2GO75747 1445 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 TRIM4Q9C037 500 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 CLSTN2Q9H4D0 955 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 PPFIA2O75334 1257 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 BAG1Q99933 345 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 RBM27Q9P2N5 1060 aaKnown RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 IGF1RP08069 1367 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 WDHD1O75717 1129 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 WWC2Q6AWC2 1192 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 PUS7Q96PZ0 661 aaKnown RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 WIZO95785 1651 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 N4BP3O15049 544 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 AKR1B10O60218 316 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 NBPF3Q9H094 633 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC113Q9H0I3 377 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.07□□□□□ -1.121e-6■■□□□ 13.5
CNOT1-216ENST00000569240 NKIRAS1Q9NYS0 192 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 ODF2LQ9ULJ1 636 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 PHLPP2Q6ZVD8 1323 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 KRT18P05783 430 aaKnown RBP8.07□□□□□ -1.12
CNOT1-216ENST00000569240 ITGB1BP2Q9UKP3 347 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 KIF24Q5T7B8 1368 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 DRP2Q13474 957 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 ELF2Q15723 593 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
CNOT1-216ENST00000569240 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms