RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 ITGBL1O95965 494 aaPredicted RBP24.46■■□□□ 1.51
SPSB3-210ENST00000568416 CCDC27Q2M243 656 aa24.46■■□□□ 1.51
SPSB3-210ENST00000568416 MPNDQ8N594 471 aa24.46■■□□□ 1.51
SPSB3-210ENST00000568416 SCNN1DP51172 638 aa24.45■■□□□ 1.5
SPSB3-210ENST00000568416 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
SPSB3-210ENST00000568416 CLEC11AQ9Y240 323 aa24.45■■□□□ 1.5
SPSB3-210ENST00000568416 TSPYL6Q8N831 410 aa24.44■■□□□ 1.5
SPSB3-210ENST00000568416 LTBP1Q14766 1721 aa24.44■■□□□ 1.5
SPSB3-210ENST00000568416 IRS4O14654 1257 aaPredicted RBP24.43■■□□□ 1.5
SPSB3-210ENST00000568416 KIAA2012Q0VF49 1180 aa24.43■■□□□ 1.5
SPSB3-210ENST00000568416 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
SPSB3-210ENST00000568416 CCDC30Q5VVM6 783 aa24.43■■□□□ 1.5
SPSB3-210ENST00000568416 CHMP4AQ9BY43 222 aa24.43■■□□□ 1.5
SPSB3-210ENST00000568416 ZNRF3Q9ULT6 936 aa24.43■■□□□ 1.5
SPSB3-210ENST00000568416 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
SPSB3-210ENST00000568416 LMOD1P29536 600 aaPredicted RBP24.42■■□□□ 1.5
SPSB3-210ENST00000568416 WWC1Q8IX03 1113 aa24.42■■□□□ 1.5
SPSB3-210ENST00000568416 ZBTB38Q8NAP3 1195 aaPredicted RBP24.42■■□□□ 1.5
SPSB3-210ENST00000568416 CELF1Q92879 486 aaKnown RBP24.42■■□□□ 1.5
SPSB3-210ENST00000568416 TSR2Q969E8 191 aaKnown RBP24.42■■□□□ 1.5
SPSB3-210ENST00000568416 MYD88Q99836 296 aa24.42■■□□□ 1.5
SPSB3-210ENST00000568416 DUOX1Q9NRD9 1551 aa24.42■■□□□ 1.5
SPSB3-210ENST00000568416 EPS15P42566 896 aa24.41■■□□□ 1.5
SPSB3-210ENST00000568416 CXCL9Q07325 125 aa24.41■■□□□ 1.5
SPSB3-210ENST00000568416 NCBP3Q53F19 620 aaKnown RBP24.41■■□□□ 1.5
SPSB3-210ENST00000568416 MAP1SQ66K74 1059 aaPredicted RBP24.41■■□□□ 1.5
SPSB3-210ENST00000568416 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
SPSB3-210ENST00000568416 CNTROBQ8N137 903 aa24.4■■□□□ 1.5
SPSB3-210ENST00000568416 CCDC191Q8NCU4 936 aa24.4■■□□□ 1.5
SPSB3-210ENST00000568416 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
SPSB3-210ENST00000568416 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.49
SPSB3-210ENST00000568416 MRS2Q9HD23 443 aa24.39■■□□□ 1.49
SPSB3-210ENST00000568416 MKRN1Q9UHC7 482 aaKnown RBP24.39■■□□□ 1.49
SPSB3-210ENST00000568416 COL4A1P02462 1669 aa24.39■■□□□ 1.49
SPSB3-210ENST00000568416 TMEM88BA6NKF7 163 aa24.38■■□□□ 1.49
SPSB3-210ENST00000568416 ANP32CO43423 234 aa24.38■■□□□ 1.49
SPSB3-210ENST00000568416 USP50Q70EL3 339 aaPredicted RBP24.38■■□□□ 1.49
SPSB3-210ENST00000568416 IL16Q14005 1332 aa24.37■■□□□ 1.49
SPSB3-210ENST00000568416 TAF1P21675 1872 aa24.37■■□□□ 1.49
SPSB3-210ENST00000568416 PCCAP05165 728 aaPredicted RBP24.37■■□□□ 1.49
SPSB3-210ENST00000568416 GPRC5DQ9NZD1 345 aa24.37■■□□□ 1.49
SPSB3-210ENST00000568416 CNTNAP1P78357 1384 aa24.37■■□□□ 1.49
SPSB3-210ENST00000568416 HSPA1AP0DMV8 641 aaKnown RBP24.36■■□□□ 1.49
SPSB3-210ENST00000568416 HSPA1BP0DMV9 641 aaKnown RBP24.36■■□□□ 1.49
SPSB3-210ENST00000568416 HSP90B1P14625 803 aaKnown RBP24.36■■□□□ 1.49
SPSB3-210ENST00000568416 CIAPIN1Q6FI81 312 aa24.36■■□□□ 1.49
SPSB3-210ENST00000568416 CWC25Q9NXE8 425 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-210ENST00000568416 RPS8P62241 208 aaKnown RBP24.35■■□□□ 1.49
SPSB3-210ENST00000568416 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-210ENST00000568416 KSR2Q6VAB6 950 aa24.35■■□□□ 1.49
SPSB3-210ENST00000568416 ADARB2Q9NS39 739 aaKnown RBP24.35■■□□□ 1.49
SPSB3-210ENST00000568416 NSFL1CQ9UNZ2 370 aaKnown RBP24.35■■□□□ 1.49
SPSB3-210ENST00000568416 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
SPSB3-210ENST00000568416 YDJCA8MPS7 323 aa24.34■■□□□ 1.49
SPSB3-210ENST00000568416 PDE8AO60658 829 aa24.34■■□□□ 1.49
SPSB3-210ENST00000568416 GMPSP49915 693 aaPredicted RBP24.34■■□□□ 1.49
SPSB3-210ENST00000568416 GPSM2P81274 684 aa24.34■■□□□ 1.49
SPSB3-210ENST00000568416 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
SPSB3-210ENST00000568416 CDHR2Q9BYE9 1310 aa24.34■■□□□ 1.49
SPSB3-210ENST00000568416 PI4KAP2A4QPH2 592 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 RAD17O75943 681 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 TNIP1Q15025 636 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 PI4KAP1Q8N8J0 262 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
SPSB3-210ENST00000568416 SEC31BQ9NQW1 1179 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 POLLQ9UGP5 575 aa24.33■■□□□ 1.49
SPSB3-210ENST00000568416 IGKV5-2P06315 115 aa24.32■■□□□ 1.48
SPSB3-210ENST00000568416 CCDC152Q4G0S7 254 aa24.31■■□□□ 1.48
SPSB3-210ENST00000568416 COL13A1Q5TAT6 717 aaPredicted RBP24.31■■□□□ 1.48
SPSB3-210ENST00000568416 G2E3Q7L622 706 aa24.31■■□□□ 1.48
SPSB3-210ENST00000568416 C6orf229H3BNL8 230 aa24.3■■□□□ 1.48
SPSB3-210ENST00000568416 TBC1D16Q8TBP0 767 aa24.3■■□□□ 1.48
SPSB3-210ENST00000568416 PODXL2Q9NZ53 605 aa24.3■■□□□ 1.48
SPSB3-210ENST00000568416 FMR1Q06787 632 aaKnown RBP eCLIP24.29■■□□□ 1.48
SPSB3-210ENST00000568416 EYA3Q99504 573 aa24.29■■□□□ 1.48
SPSB3-210ENST00000568416 BCL2L13Q9BXK5 485 aa24.29■■□□□ 1.48
SPSB3-210ENST00000568416 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
SPSB3-210ENST00000568416 RASSF10A6NK89 507 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 RIMBP2O15034 1052 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 SLC4A2P04920 1241 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 VEGFBP49765 207 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 WDR63Q8IWG1 891 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 DBNDD1Q9H9R9 158 aa24.28■■□□□ 1.48
SPSB3-210ENST00000568416 NEXNQ0ZGT2 675 aa24.27■■□□□ 1.48
SPSB3-210ENST00000568416 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-210ENST00000568416 PGAP2Q9UHJ9 254 aa24.27■■□□□ 1.48
SPSB3-210ENST00000568416 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
SPSB3-210ENST00000568416 DEFB115Q30KQ5 88 aa24.26■■□□□ 1.47
SPSB3-210ENST00000568416 GPR101Q96P66 508 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-210ENST00000568416 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
SPSB3-210ENST00000568416 SALL2Q9Y467 1007 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-210ENST00000568416 NEURL1BA8MQ27 555 aa24.25■■□□□ 1.47
SPSB3-210ENST00000568416 TRAF5O00463 557 aa24.25■■□□□ 1.47
SPSB3-210ENST00000568416 PSMD14O00487 310 aa24.25■■□□□ 1.47
SPSB3-210ENST00000568416 ECE2O60344 883 aa24.25■■□□□ 1.47
SPSB3-210ENST00000568416 HIRAP54198 1017 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-210ENST00000568416 CTSWP56202 376 aa24.25■■□□□ 1.47
SPSB3-210ENST00000568416 ZBTB12Q9Y330 459 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-210ENST00000568416 SHTN1A0MZ66 631 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms