RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 STYK1Q6J9G0 422 aa22.66■■□□□ 1.22
COMMD4-222ENST00000568034 COG6Q9Y2V7 657 aa22.66■■□□□ 1.22
COMMD4-222ENST00000568034 SUPT16HQ9Y5B9 1047 aaKnown RBP22.66■■□□□ 1.22
COMMD4-222ENST00000568034 CSF1RP07333 972 aa22.65■■□□□ 1.22
COMMD4-222ENST00000568034 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
COMMD4-222ENST00000568034 TTLL11Q8NHH1 800 aa22.65■■□□□ 1.22
COMMD4-222ENST00000568034 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.21
COMMD4-222ENST00000568034 UBTFL1P0CB47 393 aaPredicted RBP22.64■■□□□ 1.21
COMMD4-222ENST00000568034 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
COMMD4-222ENST00000568034 TAF1P21675 1872 aa22.63■■□□□ 1.21
COMMD4-222ENST00000568034 RABL6Q3YEC7 729 aaPredicted RBP22.63■■□□□ 1.21
COMMD4-222ENST00000568034 ZNF622Q969S3 477 aaKnown RBP eCLIP22.63■■□□□ 1.21
COMMD4-222ENST00000568034 CCDC85AQ96PX6 553 aaPredicted RBP22.63■■□□□ 1.21
COMMD4-222ENST00000568034 BICC1Q9H694 974 aaKnown RBP22.63■■□□□ 1.21
COMMD4-222ENST00000568034 WWC3Q9ULE0 1092 aa22.63■■□□□ 1.21
COMMD4-222ENST00000568034 CACNA1SQ13698 1873 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 SLX4Q8IY92 1834 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 GNAI3P08754 354 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 CCDC152Q4G0S7 254 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 RPGRQ92834 1020 aaKnown RBP22.62■■□□□ 1.21
COMMD4-222ENST00000568034 CRAMP1Q96RY5 1269 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 GREM2Q9H772 168 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 PIM2Q9P1W9 311 aa22.62■■□□□ 1.21
COMMD4-222ENST00000568034 FAM161AQ3B820 660 aa22.61■■□□□ 1.21
COMMD4-222ENST00000568034 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
COMMD4-222ENST00000568034 RBM17Q96I25 401 aaKnown RBP22.61■■□□□ 1.21
COMMD4-222ENST00000568034 SEC31BQ9NQW1 1179 aa22.61■■□□□ 1.21
COMMD4-222ENST00000568034 LRRFIP2Q9Y608 721 aaKnown RBP22.61■■□□□ 1.21
COMMD4-222ENST00000568034 SLC51AQ86UW1 340 aa22.6■■□□□ 1.21
COMMD4-222ENST00000568034 TTLL6Q8N841 843 aa22.6■■□□□ 1.21
COMMD4-222ENST00000568034 CNKSR1Q969H4 720 aa22.6■■□□□ 1.21
COMMD4-222ENST00000568034 DDX19BQ9UMR2 479 aa22.6■■□□□ 1.21
COMMD4-222ENST00000568034 GRAPQ13588 217 aa22.59■■□□□ 1.21
COMMD4-222ENST00000568034 PRPF40BQ6NWY9 871 aaKnown RBP22.59■■□□□ 1.21
COMMD4-222ENST00000568034 DDX46Q7L014 1031 aaKnown RBP22.59■■□□□ 1.21
COMMD4-222ENST00000568034 GRAPLQ8TC17 118 aaPredicted RBP22.59■■□□□ 1.21
COMMD4-222ENST00000568034 CELF1Q92879 486 aaKnown RBP22.59■■□□□ 1.21
COMMD4-222ENST00000568034 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
COMMD4-222ENST00000568034 YBX3P16989 372 aaKnown RBP eCLIP22.58■■□□□ 1.21
COMMD4-222ENST00000568034 DALRD3Q5D0E6 543 aaKnown RBP22.58■■□□□ 1.21
COMMD4-222ENST00000568034 C7orf43Q8WVR3 580 aa22.58■■□□□ 1.21
COMMD4-222ENST00000568034 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
COMMD4-222ENST00000568034 GNAI2P04899 355 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 ITGA6P23229 1130 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 ZBTB40Q9NUA8 1239 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 BCS1LQ9Y276 419 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 SNED1Q8TER0 1413 aa22.57■■□□□ 1.2
COMMD4-222ENST00000568034 CRBNQ96SW2 442 aa22.56■■□□□ 1.2
COMMD4-222ENST00000568034 LRRC37AA6NMS7 1700 aa22.56■■□□□ 1.2
COMMD4-222ENST00000568034 MTX1Q13505 466 aa22.55■■□□□ 1.2
COMMD4-222ENST00000568034 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
COMMD4-222ENST00000568034 PPEF1O14829 653 aaPredicted RBP22.54■■□□□ 1.2
COMMD4-222ENST00000568034 RFX5P48382 616 aaPredicted RBP22.54■■□□□ 1.2
COMMD4-222ENST00000568034 OLFM4Q6UX06 510 aa22.54■■□□□ 1.2
COMMD4-222ENST00000568034 CHMP3Q9Y3E7 222 aa22.54■■□□□ 1.2
COMMD4-222ENST00000568034 SPEF2Q9C093 1822 aa22.53■■□□□ 1.2
COMMD4-222ENST00000568034 BBOX1O75936 387 aa22.53■■□□□ 1.2
COMMD4-222ENST00000568034 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
COMMD4-222ENST00000568034 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
COMMD4-222ENST00000568034 ANKRD18BA2A2Z9 1011 aa22.52■■□□□ 1.2
COMMD4-222ENST00000568034 IFIT5Q13325 482 aaKnown RBP22.52■■□□□ 1.2
COMMD4-222ENST00000568034 CDC5LQ99459 802 aaKnown RBP22.52■■□□□ 1.2
COMMD4-222ENST00000568034 C21orf2O43822 256 aa22.51■■□□□ 1.19
COMMD4-222ENST00000568034 CCDC57Q2TAC2 916 aa22.51■■□□□ 1.19
COMMD4-222ENST00000568034 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
COMMD4-222ENST00000568034 ZNF594Q96JF6 807 aaPredicted RBP22.51■■□□□ 1.19
COMMD4-222ENST00000568034 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
COMMD4-222ENST00000568034 ATP6V0A2Q9Y487 856 aa22.51■■□□□ 1.19
COMMD4-222ENST00000568034 PNMA6EA0A0J9YXQ4 647 aa22.5■■□□□ 1.19
COMMD4-222ENST00000568034 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
COMMD4-222ENST00000568034 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
COMMD4-222ENST00000568034 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
COMMD4-222ENST00000568034 UTRNP46939 3433 aa22.5■■□□□ 1.19
COMMD4-222ENST00000568034 TMC4Q7Z404 712 aa22.49■■□□□ 1.19
COMMD4-222ENST00000568034 SP8Q8IXZ3 490 aa22.49■■□□□ 1.19
COMMD4-222ENST00000568034 KLHDC4Q8TBB5 520 aa22.49■■□□□ 1.19
COMMD4-222ENST00000568034 CHMP4BQ9H444 224 aaKnown RBP22.49■■□□□ 1.19
COMMD4-222ENST00000568034 FER1L6Q2WGJ9 1857 aa22.49■■□□□ 1.19
COMMD4-222ENST00000568034 PTPN12Q05209 780 aaKnown RBP22.48■■□□□ 1.19
COMMD4-222ENST00000568034 GPR162Q16538 588 aa22.48■■□□□ 1.19
COMMD4-222ENST00000568034 BSDC1Q9NW68 430 aaPredicted RBP22.48■■□□□ 1.19
COMMD4-222ENST00000568034 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 SRGAP3O43295 1099 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 IGHMBP2P38935 993 aaKnown RBP22.47■■□□□ 1.19
COMMD4-222ENST00000568034 ATP8B2P98198 1209 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 POLA2Q14181 598 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 CCDC93Q567U6 631 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 A0A1B0GUL6 1792 aa22.47■■□□□ 1.19
COMMD4-222ENST00000568034 NFKBIEO00221 500 aa22.46■■□□□ 1.19
COMMD4-222ENST00000568034 IRX6P78412 446 aaPredicted RBP22.46■■□□□ 1.19
COMMD4-222ENST00000568034 SIRT2Q8IXJ6 389 aa22.46■■□□□ 1.19
COMMD4-222ENST00000568034 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
COMMD4-222ENST00000568034 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
COMMD4-222ENST00000568034 PUS3Q9BZE2 481 aaKnown RBP22.46■■□□□ 1.19
COMMD4-222ENST00000568034 SOGA3Q5TF21 947 aa22.45■■□□□ 1.18
COMMD4-222ENST00000568034 CC2D2BQ6DHV5 1058 aa22.45■■□□□ 1.18
COMMD4-222ENST00000568034 MINPP1Q9UNW1 487 aa22.45■■□□□ 1.18
COMMD4-222ENST00000568034 PA2G4Q9UQ80 394 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms