RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 TTLL11Q8NHH1 800 aa28.42■■■□□ 2.14
E4F1-208ENST00000567111 CHMP4BQ9H444 224 aaKnown RBP28.42■■■□□ 2.14
E4F1-208ENST00000567111 RLBP1P12271 317 aa28.41■■■□□ 2.14
E4F1-208ENST00000567111 BBOX1O75936 387 aa28.4■■■□□ 2.14
E4F1-208ENST00000567111 CSF1RP07333 972 aa28.4■■■□□ 2.14
E4F1-208ENST00000567111 RRP1P56182 461 aaKnown RBP28.4■■■□□ 2.14
E4F1-208ENST00000567111 TMX4Q9H1E5 349 aaPredicted RBP28.4■■■□□ 2.14
E4F1-208ENST00000567111 WWC3Q9ULE0 1092 aa28.4■■■□□ 2.14
E4F1-208ENST00000567111 DDX60Q8IY21 1712 aaKnown RBP28.4■■■□□ 2.14
E4F1-208ENST00000567111 FOXO4P98177 505 aa28.39■■■□□ 2.14
E4F1-208ENST00000567111 SUCLG2Q96I99 432 aa28.39■■■□□ 2.14
E4F1-208ENST00000567111 KIAA1551Q9HCM1 1747 aa28.39■■■□□ 2.14
E4F1-208ENST00000567111 TNRC6CQ9HCJ0 1690 aaKnown RBP28.38■■■□□ 2.13
E4F1-208ENST00000567111 GRIN3BO60391 1043 aa28.38■■■□□ 2.13
E4F1-208ENST00000567111 LMBR1LQ6UX01 489 aa28.38■■■□□ 2.13
E4F1-208ENST00000567111 CCDC85AQ96PX6 553 aaPredicted RBP28.38■■■□□ 2.13
E4F1-208ENST00000567111 MEIS3Q99687 375 aa28.38■■■□□ 2.13
E4F1-208ENST00000567111 LAMB2P55268 1798 aa28.37■■■□□ 2.13
E4F1-208ENST00000567111 GRAPQ13588 217 aa28.37■■■□□ 2.13
E4F1-208ENST00000567111 PRPF40BQ6NWY9 871 aaKnown RBP28.37■■■□□ 2.13
E4F1-208ENST00000567111 TMC4Q7Z404 712 aa28.37■■■□□ 2.13
E4F1-208ENST00000567111 GRAPLQ8TC17 118 aaPredicted RBP28.37■■■□□ 2.13
E4F1-208ENST00000567111 CDC5LQ99459 802 aaKnown RBP28.37■■■□□ 2.13
E4F1-208ENST00000567111 DDX19BQ9UMR2 479 aa28.37■■■□□ 2.13
E4F1-208ENST00000567111 CHMP3Q9Y3E7 222 aa28.37■■■□□ 2.13
E4F1-208ENST00000567111 RPS8P62241 208 aaKnown RBP28.36■■■□□ 2.13
E4F1-208ENST00000567111 MVPQ14764 893 aaKnown RBP28.36■■■□□ 2.13
E4F1-208ENST00000567111 SOGA3Q5TF21 947 aa28.36■■■□□ 2.13
E4F1-208ENST00000567111 COG6Q9Y2V7 657 aa28.36■■■□□ 2.13
E4F1-208ENST00000567111 DLEC1Q9Y238 1755 aa28.36■■■□□ 2.13
E4F1-208ENST00000567111 SRCAPQ6ZRS2 3230 aa28.36■■■□□ 2.13
E4F1-208ENST00000567111 ZBTB7BO15156 539 aaPredicted RBP28.35■■■□□ 2.13
E4F1-208ENST00000567111 GNAI2P04899 355 aa28.35■■■□□ 2.13
E4F1-208ENST00000567111 EPHA10Q5JZY3 1008 aa28.35■■■□□ 2.13
E4F1-208ENST00000567111 RTL9Q8NET4 1388 aa28.35■■■□□ 2.13
E4F1-208ENST00000567111 COL11A2P13942 1736 aaPredicted RBP28.35■■■□□ 2.13
E4F1-208ENST00000567111 MYH3P11055 1940 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 ANKRD18BA2A2Z9 1011 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 IFIT5Q13325 482 aaKnown RBP28.34■■■□□ 2.13
E4F1-208ENST00000567111 CCDC57Q2TAC2 916 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 CC2D2BQ6DHV5 1058 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 KAZALD1Q96I82 304 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 BICC1Q9H694 974 aaKnown RBP28.34■■■□□ 2.13
E4F1-208ENST00000567111 GREM2Q9H772 168 aa28.34■■■□□ 2.13
E4F1-208ENST00000567111 PPEF1O14829 653 aaPredicted RBP28.33■■■□□ 2.13
E4F1-208ENST00000567111 ANKRD18AQ8IVF6 992 aa28.33■■■□□ 2.13
E4F1-208ENST00000567111 SEC31BQ9NQW1 1179 aa28.33■■■□□ 2.13
E4F1-208ENST00000567111 ZNF219Q9P2Y4 722 aaPredicted RBP28.33■■■□□ 2.13
E4F1-208ENST00000567111 SUPT16HQ9Y5B9 1047 aaKnown RBP28.33■■■□□ 2.13
E4F1-208ENST00000567111 LRRFIP2Q9Y608 721 aaKnown RBP28.33■■■□□ 2.13
E4F1-208ENST00000567111 C21orf2O43822 256 aa28.32■■■□□ 2.12
E4F1-208ENST00000567111 ITGA6P23229 1130 aa28.32■■■□□ 2.12
E4F1-208ENST00000567111 RABL6Q3YEC7 729 aaPredicted RBP28.32■■■□□ 2.12
E4F1-208ENST00000567111 GRIPAP1Q4V328 841 aa28.32■■■□□ 2.12
E4F1-208ENST00000567111 YBX3P16989 372 aaKnown RBP eCLIP28.31■■■□□ 2.128e-9■□□□□ 9.8
E4F1-208ENST00000567111 IGHMBP2P38935 993 aaKnown RBP28.31■■■□□ 2.12
E4F1-208ENST00000567111 C20orf194Q5TEA3 1177 aa28.31■■■□□ 2.12
E4F1-208ENST00000567111 SP8Q8IXZ3 490 aa28.31■■■□□ 2.12
E4F1-208ENST00000567111 CELF1Q92879 486 aaKnown RBP28.31■■■□□ 2.12
E4F1-208ENST00000567111 BRCA1P38398 1863 aaKnown RBP28.31■■■□□ 2.12
E4F1-208ENST00000567111 CENPBP07199 599 aaPredicted RBP28.3■■■□□ 2.12
E4F1-208ENST00000567111 FAM161AQ3B820 660 aa28.3■■■□□ 2.12
E4F1-208ENST00000567111 TAF7LQ5H9L4 462 aa28.3■■■□□ 2.12
E4F1-208ENST00000567111 ARHGAP27Q6ZUM4 889 aa28.3■■■□□ 2.12
E4F1-208ENST00000567111 C7orf43Q8WVR3 580 aa28.3■■■□□ 2.12
E4F1-208ENST00000567111 ATP6V0A2Q9Y487 856 aa28.3■■■□□ 2.12
E4F1-208ENST00000567111 ANKRD44Q8N8A2 993 aa28.29■■■□□ 2.12
E4F1-208ENST00000567111 MPHOSPH8Q99549 860 aa28.29■■■□□ 2.12
E4F1-208ENST00000567111 SLX4Q8IY92 1834 aa28.29■■■□□ 2.12
E4F1-208ENST00000567111 CCDC93Q567U6 631 aa28.28■■■□□ 2.12
E4F1-208ENST00000567111 RTKN2Q8IZC4 609 aa28.28■■■□□ 2.12
E4F1-208ENST00000567111 BSDC1Q9NW68 430 aaPredicted RBP28.26■■■□□ 2.11
E4F1-208ENST00000567111 ARFGEF1Q9Y6D6 1849 aa28.25■■■□□ 2.11
E4F1-208ENST00000567111 CACNA1SQ13698 1873 aa28.23■■■□□ 2.11
E4F1-208ENST00000567111 ZBTB40Q9NUA8 1239 aa28.23■■■□□ 2.11
E4F1-208ENST00000567111 TAF1P21675 1872 aa28.22■■■□□ 2.11
E4F1-208ENST00000567111 MTX1Q13505 466 aa28.22■■■□□ 2.11
E4F1-208ENST00000567111 LDHAL6AQ6ZMR3 332 aa28.22■■■□□ 2.11
E4F1-208ENST00000567111 ATP8B2P98198 1209 aa28.21■■■□□ 2.11
E4F1-208ENST00000567111 MPNDQ8N594 471 aa28.21■■■□□ 2.11
E4F1-208ENST00000567111 CNNM1Q9NRU3 951 aa28.21■■■□□ 2.11
E4F1-208ENST00000567111 SRGAP3O43295 1099 aa28.2■■■□□ 2.1
E4F1-208ENST00000567111 OLFM4Q6UX06 510 aa28.19■■■□□ 2.1
E4F1-208ENST00000567111 DPP8Q6V1X1 898 aaPredicted RBP28.19■■■□□ 2.1
E4F1-208ENST00000567111 SUPT20HQ8NEM7 779 aa28.19■■■□□ 2.1
E4F1-208ENST00000567111 ZNF594Q96JF6 807 aaPredicted RBP28.19■■■□□ 2.1
E4F1-208ENST00000567111 ANKRD2Q9GZV1 360 aa28.19■■■□□ 2.1
E4F1-208ENST00000567111 C1orf115Q9H7X2 142 aa28.19■■■□□ 2.1
E4F1-208ENST00000567111 ANKIB1Q9P2G1 1089 aa28.19■■■□□ 2.1
E4F1-208ENST00000567111 NSFL1CQ9UNZ2 370 aaKnown RBP28.19■■■□□ 2.1
E4F1-208ENST00000567111 RPAP2Q8IXW5 612 aaPredicted RBP28.18■■■□□ 2.1
E4F1-208ENST00000567111 TAOK3Q9H2K8 898 aa28.18■■■□□ 2.1
E4F1-208ENST00000567111 MINPP1Q9UNW1 487 aa28.18■■■□□ 2.1
E4F1-208ENST00000567111 FKBP4Q02790 459 aaKnown RBP eCLIP28.17■■■□□ 2.1
E4F1-208ENST00000567111 CRBNQ96SW2 442 aa28.17■■■□□ 2.1
E4F1-208ENST00000567111 PSMD1Q99460 953 aa28.17■■■□□ 2.1
E4F1-208ENST00000567111 FBXO3Q9UK99 471 aa28.17■■■□□ 2.1
E4F1-208ENST00000567111 AAMPQ13685 434 aa28.16■■■□□ 2.1
E4F1-208ENST00000567111 LTBP3Q9NS15 1303 aa28.16■■■□□ 2.1
E4F1-208ENST00000567111 RFX5P48382 616 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms