RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
FANCA-220ENST00000566409 CELF1Q92879 486 aaKnown RBP18.87■□□□□ 0.61
FANCA-220ENST00000566409 RTFDC1Q9BY42 306 aaPredicted RBP18.87■□□□□ 0.61
FANCA-220ENST00000566409 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
FANCA-220ENST00000566409 MAP3K2Q9Y2U5 619 aa18.87■□□□□ 0.61
FANCA-220ENST00000566409 PI4KAP2A4QPH2 592 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 VAMP4O75379 141 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 IGKV5-2P06315 115 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 KSR2Q6VAB6 950 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 PI4KAP1Q8N8J0 262 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 CCDC191Q8NCU4 936 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 JDP2Q8WYK2 163 aa18.86■□□□□ 0.61
FANCA-220ENST00000566409 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
FANCA-220ENST00000566409 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
FANCA-220ENST00000566409 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
FANCA-220ENST00000566409 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
FANCA-220ENST00000566409 TAF1DQ9H5J8 278 aaPredicted RBP18.85■□□□□ 0.61
FANCA-220ENST00000566409 LTBP1Q14766 1721 aa18.84■□□□□ 0.61
FANCA-220ENST00000566409 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
FANCA-220ENST00000566409 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
FANCA-220ENST00000566409 AOC3Q16853 763 aa18.84■□□□□ 0.61
FANCA-220ENST00000566409 GPC2Q8N158 579 aa18.84■□□□□ 0.61
FANCA-220ENST00000566409 MPNDQ8N594 471 aa18.84■□□□□ 0.61
FANCA-220ENST00000566409 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
FANCA-220ENST00000566409 IQCA1LA6NCM1 817 aa18.83■□□□□ 0.6
FANCA-220ENST00000566409 PPIP5K2O43314 1243 aa18.83■□□□□ 0.6
FANCA-220ENST00000566409 DPP8Q6V1X1 898 aaPredicted RBP18.83■□□□□ 0.6
FANCA-220ENST00000566409 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
FANCA-220ENST00000566409 ADAMTSL1Q8N6G6 1762 aa18.83■□□□□ 0.6
FANCA-220ENST00000566409 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
FANCA-220ENST00000566409 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
FANCA-220ENST00000566409 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
FANCA-220ENST00000566409 SEC31BQ9NQW1 1179 aa18.82■□□□□ 0.6
FANCA-220ENST00000566409 HACL1Q9UJ83 578 aa18.82■□□□□ 0.6
FANCA-220ENST00000566409 ZNF521Q96K83 1311 aa18.81■□□□□ 0.6
FANCA-220ENST00000566409 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
FANCA-220ENST00000566409 FLIIQ13045 1269 aa18.81■□□□□ 0.6
FANCA-220ENST00000566409 TMC4Q7Z404 712 aa18.81■□□□□ 0.6
FANCA-220ENST00000566409 NIM1KQ8IY84 436 aa18.81■□□□□ 0.6
FANCA-220ENST00000566409 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
FANCA-220ENST00000566409 MYH3P11055 1940 aa18.8■□□□□ 0.6
FANCA-220ENST00000566409 PDE8AO60658 829 aa18.8■□□□□ 0.6
FANCA-220ENST00000566409 EPHX2P34913 555 aa18.8■□□□□ 0.6
FANCA-220ENST00000566409 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
FANCA-220ENST00000566409 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
FANCA-220ENST00000566409 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
FANCA-220ENST00000566409 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 NEURL1BA8MQ27 555 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 SCNN1DP51172 638 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 GPSM2P81274 684 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 CXCL9Q07325 125 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 LDHDQ86WU2 507 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
FANCA-220ENST00000566409 ZNRF3Q9ULT6 936 aa18.79■□□□□ 0.6
FANCA-220ENST00000566409 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
FANCA-220ENST00000566409 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
FANCA-220ENST00000566409 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
FANCA-220ENST00000566409 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
FANCA-220ENST00000566409 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
FANCA-220ENST00000566409 EPS15P42566 896 aa18.77■□□□□ 0.6
FANCA-220ENST00000566409 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.6
FANCA-220ENST00000566409 CCDC152Q4G0S7 254 aa18.77■□□□□ 0.6
FANCA-220ENST00000566409 KLRG1Q96E93 195 aa18.77■□□□□ 0.6
FANCA-220ENST00000566409 H7C1W4 665 aa18.76■□□□□ 0.59
FANCA-220ENST00000566409 ITGBL1O95965 494 aaPredicted RBP18.76■□□□□ 0.59
FANCA-220ENST00000566409 FKBP5Q13451 457 aaPredicted RBP18.76■□□□□ 0.59
FANCA-220ENST00000566409 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
FANCA-220ENST00000566409 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
FANCA-220ENST00000566409 CASP7P55210 303 aa18.75■□□□□ 0.59
FANCA-220ENST00000566409 GCKRQ14397 625 aa18.75■□□□□ 0.59
FANCA-220ENST00000566409 PNMA8AQ86V59 439 aaPredicted RBP18.75■□□□□ 0.59
FANCA-220ENST00000566409 TTLL11Q8NHH1 800 aa18.75■□□□□ 0.59
FANCA-220ENST00000566409 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
FANCA-220ENST00000566409 GPR101Q96P66 508 aaPredicted RBP18.75■□□□□ 0.59
FANCA-220ENST00000566409 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 RAD17O75943 681 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 CTSWP56202 376 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 WASHC4Q2M389 1173 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 UBE3BQ7Z3V4 1068 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 TBC1D16Q8TBP0 767 aa18.74■□□□□ 0.59
FANCA-220ENST00000566409 F6X3S4 739 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 C6orf229H3BNL8 230 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 RIMBP2O15034 1052 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 MAP1SQ66K74 1059 aaPredicted RBP18.73■□□□□ 0.59
FANCA-220ENST00000566409 LINS1Q8NG48 757 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 GREM2Q9H772 168 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
FANCA-220ENST00000566409 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
FANCA-220ENST00000566409 GMPSP49915 693 aaPredicted RBP18.72■□□□□ 0.59
FANCA-220ENST00000566409 CIAPIN1Q6FI81 312 aa18.72■□□□□ 0.59
FANCA-220ENST00000566409 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
FANCA-220ENST00000566409 KCNQ5Q9NR82 932 aa18.72■□□□□ 0.59
FANCA-220ENST00000566409 WTIPA6NIX2 430 aaPredicted RBP18.71■□□□□ 0.59
FANCA-220ENST00000566409 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
FANCA-220ENST00000566409 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
FANCA-220ENST00000566409 DBNDD1Q9H9R9 158 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms