RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
KNOP1-203ENST00000565844 CDHR2Q9BYE9 1310 aa19.16■□□□□ 0.66
KNOP1-203ENST00000565844 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
KNOP1-203ENST00000565844 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
KNOP1-203ENST00000565844 CASP7P55210 303 aa19.15■□□□□ 0.66
KNOP1-203ENST00000565844 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
KNOP1-203ENST00000565844 IRS4O14654 1257 aaPredicted RBP19.14■□□□□ 0.65
KNOP1-203ENST00000565844 PRR5LQ6MZQ0 368 aa19.14■□□□□ 0.65
KNOP1-203ENST00000565844 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
KNOP1-203ENST00000565844 HDAC5Q9UQL6 1122 aa19.14■□□□□ 0.65
KNOP1-203ENST00000565844 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.65
KNOP1-203ENST00000565844 GNAI2P04899 355 aa19.13■□□□□ 0.65
KNOP1-203ENST00000565844 ST5P78524 1137 aa19.13■□□□□ 0.65
KNOP1-203ENST00000565844 SUCLG2Q96I99 432 aa19.13■□□□□ 0.65
KNOP1-203ENST00000565844 HCLS1P14317 486 aaPredicted RBP19.12■□□□□ 0.65
KNOP1-203ENST00000565844 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
KNOP1-203ENST00000565844 RASSF7Q02833 373 aa19.11■□□□□ 0.65
KNOP1-203ENST00000565844 C9orf131Q5VYM1 1079 aa19.11■□□□□ 0.65
KNOP1-203ENST00000565844 C2CD5Q86YS7 1000 aa19.11■□□□□ 0.65
KNOP1-203ENST00000565844 RIC1Q4ADV7 1423 aa19.11■□□□□ 0.65
KNOP1-203ENST00000565844 PDE8AO60658 829 aa19.1■□□□□ 0.65
KNOP1-203ENST00000565844 AAMPQ13685 434 aa19.1■□□□□ 0.65
KNOP1-203ENST00000565844 SLC10A5Q5PT55 438 aa19.1■□□□□ 0.65
KNOP1-203ENST00000565844 KAZALD1Q96I82 304 aa19.1■□□□□ 0.65
KNOP1-203ENST00000565844 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
KNOP1-203ENST00000565844 FOXO4P98177 505 aa19.09■□□□□ 0.65
KNOP1-203ENST00000565844 EPHA10Q5JZY3 1008 aa19.09■□□□□ 0.65
KNOP1-203ENST00000565844 PLA2G12BQ9BX93 195 aa19.09■□□□□ 0.65
KNOP1-203ENST00000565844 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
KNOP1-203ENST00000565844 CTSWP56202 376 aa19.08■□□□□ 0.65
KNOP1-203ENST00000565844 RNF181Q9P0P0 153 aa19.08■□□□□ 0.65
KNOP1-203ENST00000565844 CEP350Q5VT06 3117 aa19.08■□□□□ 0.64
KNOP1-203ENST00000565844 TIAM2Q8IVF5 1701 aa19.07■□□□□ 0.64
KNOP1-203ENST00000565844 ANKRD44Q8N8A2 993 aa19.07■□□□□ 0.64
KNOP1-203ENST00000565844 ZNF622Q969S3 477 aaKnown RBP eCLIP19.07■□□□□ 0.646e-7■■■□□ 17.7
KNOP1-203ENST00000565844 SLX4Q8IY92 1834 aa19.07■□□□□ 0.64
KNOP1-203ENST00000565844 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
KNOP1-203ENST00000565844 H0YIN7 160 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 KIF3CO14782 793 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 LMBR1LQ6UX01 489 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 NLRP3Q96P20 1036 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 NMRK2Q9NPI5 230 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 CHMP3Q9Y3E7 222 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 RABL6Q3YEC7 729 aaPredicted RBP19.06■□□□□ 0.64
KNOP1-203ENST00000565844 CEP85Q6P2H3 762 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 TTLL11Q8NHH1 800 aa19.06■□□□□ 0.64
KNOP1-203ENST00000565844 CCDC85AQ96PX6 553 aaPredicted RBP19.06■□□□□ 0.64
KNOP1-203ENST00000565844 PDE6BP35913 854 aa19.05■□□□□ 0.64
KNOP1-203ENST00000565844 TTLL6Q8N841 843 aa19.05■□□□□ 0.64
KNOP1-203ENST00000565844 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
KNOP1-203ENST00000565844 TAF1P21675 1872 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 CSF1RP07333 972 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 MTX1Q13505 466 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 FAM161AQ3B820 660 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 CCDC152Q4G0S7 254 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
KNOP1-203ENST00000565844 FER1L6Q2WGJ9 1857 aa19.04■□□□□ 0.64
KNOP1-203ENST00000565844 SRGAP3O43295 1099 aa19.03■□□□□ 0.64
KNOP1-203ENST00000565844 PRELPP51888 382 aa19.03■□□□□ 0.64
KNOP1-203ENST00000565844 ATP8B2P98198 1209 aa19.03■□□□□ 0.64
KNOP1-203ENST00000565844 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
KNOP1-203ENST00000565844 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
KNOP1-203ENST00000565844 GREM2Q9H772 168 aa19.03■□□□□ 0.64
KNOP1-203ENST00000565844 RTL9Q8NET4 1388 aa19.02■□□□□ 0.64
KNOP1-203ENST00000565844 PNMA6EA0A0J9YXQ4 647 aa19.02■□□□□ 0.64
KNOP1-203ENST00000565844 CRY2Q49AN0 593 aa19.02■□□□□ 0.64
KNOP1-203ENST00000565844 DICER1Q9UPY3 1922 aaKnown RBP19.01■□□□□ 0.63
KNOP1-203ENST00000565844 IFIT5Q13325 482 aaKnown RBP19.01■□□□□ 0.63
KNOP1-203ENST00000565844 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
KNOP1-203ENST00000565844 SIRT2Q8IXJ6 389 aa19.01■□□□□ 0.63
KNOP1-203ENST00000565844 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
KNOP1-203ENST00000565844 COL4A1P02462 1669 aa19■□□□□ 0.63
KNOP1-203ENST00000565844 KLRG2A4D1S0 409 aaPredicted RBP19■□□□□ 0.63
KNOP1-203ENST00000565844 C21orf2O43822 256 aa19■□□□□ 0.63
KNOP1-203ENST00000565844 HMMRO75330 724 aa19■□□□□ 0.63
KNOP1-203ENST00000565844 ITGA6P23229 1130 aa19■□□□□ 0.63
KNOP1-203ENST00000565844 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
KNOP1-203ENST00000565844 DDX46Q7L014 1031 aaKnown RBP18.99■□□□□ 0.63
KNOP1-203ENST00000565844 SSH3Q8TE77 659 aa18.99■□□□□ 0.63
KNOP1-203ENST00000565844 NFKBIEO00221 500 aa18.98■□□□□ 0.63
KNOP1-203ENST00000565844 SRGNP10124 158 aa18.98■□□□□ 0.63
KNOP1-203ENST00000565844 POLA2Q14181 598 aa18.98■□□□□ 0.63
KNOP1-203ENST00000565844 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
KNOP1-203ENST00000565844 PDZRN3Q9UPQ7 1066 aa18.98■□□□□ 0.63
KNOP1-203ENST00000565844 NPR1P16066 1061 aa18.97■□□□□ 0.63
KNOP1-203ENST00000565844 RFX5P48382 616 aaPredicted RBP18.97■□□□□ 0.63
KNOP1-203ENST00000565844 TAF7LQ5H9L4 462 aa18.97■□□□□ 0.63
KNOP1-203ENST00000565844 RBM17Q96I25 401 aaKnown RBP18.97■□□□□ 0.63
KNOP1-203ENST00000565844 RRAGCQ9HB90 399 aa18.97■□□□□ 0.63
KNOP1-203ENST00000565844 HSPA6P17066 643 aa18.96■□□□□ 0.63
KNOP1-203ENST00000565844 LMNB1P20700 586 aa18.96■□□□□ 0.63
KNOP1-203ENST00000565844 HOXA10P31260 410 aaPredicted RBP18.96■□□□□ 0.63
KNOP1-203ENST00000565844 HDAC1Q13547 482 aaPredicted RBP18.96■□□□□ 0.63
KNOP1-203ENST00000565844 KLHDC4Q8TBB5 520 aa18.96■□□□□ 0.63
KNOP1-203ENST00000565844 MASTLQ96GX5 879 aa18.96■□□□□ 0.63
KNOP1-203ENST00000565844 ZNF594Q96JF6 807 aaPredicted RBP18.96■□□□□ 0.63
KNOP1-203ENST00000565844 CDC5LQ99459 802 aaKnown RBP18.96■□□□□ 0.63
KNOP1-203ENST00000565844 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms