RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GRAPLQ8TC17 118 aaPredicted RBP23.45■■□□□ 1.34
SYNGR3-204ENST00000564642 TAF1P21675 1872 aa23.45■■□□□ 1.34
SYNGR3-204ENST00000564642 IARSP41252 1262 aaKnown RBP23.44■■□□□ 1.34
SYNGR3-204ENST00000564642 TOMM70O94826 608 aa23.43■■□□□ 1.34
SYNGR3-204ENST00000564642 IGKV5-2P06315 115 aa23.43■■□□□ 1.34
SYNGR3-204ENST00000564642 SP8Q8IXZ3 490 aa23.43■■□□□ 1.34
SYNGR3-204ENST00000564642 JARID2Q92833 1246 aaPredicted RBP23.43■■□□□ 1.34
SYNGR3-204ENST00000564642 TMC4Q7Z404 712 aa23.42■■□□□ 1.34
SYNGR3-204ENST00000564642 DNAAF4Q8WXU2 420 aa23.42■■□□□ 1.34
SYNGR3-204ENST00000564642 SNED1Q8TER0 1413 aa23.42■■□□□ 1.34
SYNGR3-204ENST00000564642 PDE8AO60658 829 aa23.41■■□□□ 1.34
SYNGR3-204ENST00000564642 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
SYNGR3-204ENST00000564642 CWF19L2Q2TBE0 894 aaKnown RBP23.41■■□□□ 1.34
SYNGR3-204ENST00000564642 MIER1Q8N108 512 aa23.41■■□□□ 1.34
SYNGR3-204ENST00000564642 NEURL1BA8MQ27 555 aa23.4■■□□□ 1.34
SYNGR3-204ENST00000564642 SLFN5Q08AF3 891 aa23.4■■□□□ 1.34
SYNGR3-204ENST00000564642 JDP2Q8WYK2 163 aa23.4■■□□□ 1.34
SYNGR3-204ENST00000564642 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
SYNGR3-204ENST00000564642 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
SYNGR3-204ENST00000564642 MPNDQ8N594 471 aa23.39■■□□□ 1.33
SYNGR3-204ENST00000564642 SUPT20HQ8NEM7 779 aa23.39■■□□□ 1.33
SYNGR3-204ENST00000564642 CDHR2Q9BYE9 1310 aa23.38■■□□□ 1.33
SYNGR3-204ENST00000564642 DDNO94850 711 aaPredicted RBP23.38■■□□□ 1.33
SYNGR3-204ENST00000564642 CCDC152Q4G0S7 254 aa23.38■■□□□ 1.33
SYNGR3-204ENST00000564642 LARGE2Q8N3Y3 721 aa23.38■■□□□ 1.33
SYNGR3-204ENST00000564642 CELF1Q92879 486 aaKnown RBP23.38■■□□□ 1.33
SYNGR3-204ENST00000564642 WDR90Q96KV7 1748 aa23.37■■□□□ 1.33
SYNGR3-204ENST00000564642 LINS1Q8NG48 757 aa23.37■■□□□ 1.33
SYNGR3-204ENST00000564642 RPS8P62241 208 aaKnown RBP23.36■■□□□ 1.33
SYNGR3-204ENST00000564642 GCKRQ14397 625 aa23.36■■□□□ 1.33
SYNGR3-204ENST00000564642 RBM46Q8TBY0 533 aaKnown RBP23.36■■□□□ 1.33
SYNGR3-204ENST00000564642 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
SYNGR3-204ENST00000564642 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
SYNGR3-204ENST00000564642 F6X3S4 739 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 H7C1W4 665 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 FZD9O00144 591 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 PPIP5K2O43314 1243 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 UBE3BQ7Z3V4 1068 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 CCDC85AQ96PX6 553 aaPredicted RBP23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 RTFDC1Q9BY42 306 aaPredicted RBP23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 MYH3P11055 1940 aa23.35■■□□□ 1.33
SYNGR3-204ENST00000564642 EIF6P56537 245 aaKnown RBP23.34■■□□□ 1.33
SYNGR3-204ENST00000564642 DNAJC5GQ8N7S2 189 aa23.34■■□□□ 1.33
SYNGR3-204ENST00000564642 SEC31BQ9NQW1 1179 aa23.34■■□□□ 1.33
SYNGR3-204ENST00000564642 ZNF541Q9H0D2 1346 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 POTECB2RU33 542 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 CTSWP56202 376 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 AOC3Q16853 763 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 NIM1KQ8IY84 436 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 TNS4Q8IZW8 715 aa23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.33
SYNGR3-204ENST00000564642 LRRC37AA6NMS7 1700 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 BEND3Q5T5X7 828 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 SLC4A10Q6U841 1118 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 TTLL11Q8NHH1 800 aa23.31■■□□□ 1.32
SYNGR3-204ENST00000564642 FSTL1Q12841 308 aa23.3■■□□□ 1.32
SYNGR3-204ENST00000564642 TRMT2AQ8IZ69 625 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-204ENST00000564642 GPC2Q8N158 579 aa23.3■■□□□ 1.32
SYNGR3-204ENST00000564642 MRPL50Q8N5N7 158 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-204ENST00000564642 L3MBTL3Q96JM7 780 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-204ENST00000564642 COL4A1P02462 1669 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 COL4A5P29400 1685 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 SCN4AP35499 1836 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 KIAA2012Q0VF49 1180 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 SMC1BQ8NDV3 1235 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 CDC5LQ99459 802 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 GJA3Q9Y6H8 435 aa23.29■■□□□ 1.32
SYNGR3-204ENST00000564642 C6orf229H3BNL8 230 aa23.28■■□□□ 1.32
SYNGR3-204ENST00000564642 APLP1P51693 650 aa23.28■■□□□ 1.32
SYNGR3-204ENST00000564642 GPSM2P81274 684 aa23.28■■□□□ 1.32
SYNGR3-204ENST00000564642 PLA2G12BQ9BX93 195 aa23.28■■□□□ 1.32
SYNGR3-204ENST00000564642 CASP7P55210 303 aa23.27■■□□□ 1.32
SYNGR3-204ENST00000564642 WASHC4Q2M389 1173 aa23.27■■□□□ 1.32
SYNGR3-204ENST00000564642 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
SYNGR3-204ENST00000564642 GREM2Q9H772 168 aa23.27■■□□□ 1.32
SYNGR3-204ENST00000564642 ZNRF3Q9ULT6 936 aa23.27■■□□□ 1.32
SYNGR3-204ENST00000564642 ALDH1L1O75891 902 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 ALDH1L2Q3SY69 923 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 EYA3Q99504 573 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 SRCIN1Q9C0H9 1055 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 ANKIB1Q9P2G1 1089 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 PTPRCP08575 1304 aa23.26■■□□□ 1.31
SYNGR3-204ENST00000564642 CT47B1P0C2W7 299 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 C9orf78Q9NZ63 289 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 RTL9Q8NET4 1388 aa23.25■■□□□ 1.31
SYNGR3-204ENST00000564642 DUOX1Q9NRD9 1551 aa23.24■■□□□ 1.31
SYNGR3-204ENST00000564642 RIMBP2O15034 1052 aa23.24■■□□□ 1.31
SYNGR3-204ENST00000564642 TAF1DQ9H5J8 278 aaPredicted RBP23.24■■□□□ 1.31
SYNGR3-204ENST00000564642 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
SYNGR3-204ENST00000564642 GRM8O00222 908 aa23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 CSF1RP07333 972 aa23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 IGHMBP2P38935 993 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 TBC1D16Q8TBP0 767 aa23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 GGA1Q9UJY5 639 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms