RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ATP11A	P98196	1134 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	DTNBP1	Q96EV8	351 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	HMG20B	Q9P0W2	317 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	RBM27	Q9P2N5	1060 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	LRRC23	Q53EV4	343 aa	Predicted RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	SYT10	Q6XYQ8	523 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	ANKRD27	Q96NW4	1050 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	SURF6	O75683	361 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	SEMA3F	Q13275	785 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	VPS53	Q5VIR6	699 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF10	Q6P3W6	841 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	DAAM2	Q86T65	1068 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	MAP7	Q14244	749 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	KCNG4	Q8TDN1	519 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	LRRD1	A4D1F6	860 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	WHAMMP3	Q1A5X7	153 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	TEX9	Q8N6V9	391 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	CCHCR1	Q8TD31	782 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	TAF4B	Q92750	862 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	BCL2L13	Q9BXK5	485 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	RNF14	Q9UBS8	474 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	DRP2	Q13474	957 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	HSP90AB2P	Q58FF8	381 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CACNA2D4	Q7Z3S7	1137 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	RRP7A	Q9Y3A4	280 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC151	A5D8V7	595 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	IFI16	Q16666	785 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	RAB11FIP4	Q86YS3	637 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	MIS12	Q9H081	205 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	TRIM6	Q9C030	488 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	HSP90AA5P	Q58FG0	334 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CERS3	Q8IU89	383 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CCAR1	Q8IX12	1150 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	LLPH	Q9BRT6	129 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PER1	O15534	1290 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	MYZAP	P0CAP1	466 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	BLOC1S2	Q6QNY1	142 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	JPH2	Q9BR39	696 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	SSH1	Q8WYL5	1049 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ZNF526	Q8TF50	670 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	SLC4A10	Q6U841	1118 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	LAMC1	P11047	1609 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ZBTB7B	O15156	539 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CDKL5	O76039	1030 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	XBP1	P17861	261 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	RNF168	Q8IYW5	571 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	E2F4	Q16254	413 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ANKRD24	Q8TF21	1146 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	FIBP	O43427	364 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GDAP1L1	Q96MZ0	367 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	BAG1	Q99933	345 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PHAX	Q9H814	394 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GLRX3	O76003	335 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CHRM1	P11229	460 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	MSL3	Q8N5Y2	521 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	DACT1	Q9NYF0	836 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ZNF215	Q9UL58	517 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PTPRC	P08575	1304 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	HOOK3	Q86VS8	718 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	JAKMIP1	Q96N16	626 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288		U3KPZ7	1027 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PLXNC1	O60486	1568 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GOLGA6C	A6NDK9	693 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GOLGA6D	P0CG33	693 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	SDS	P20132	328 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GBP1	P32455	592 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	RNF10	Q8N5U6	811 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	TM6SF1	Q9BZW5	370 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GOLGA6A	Q9NYA3	693 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	MAPKBP1	O60336	1514 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PARD6B	Q9BYG5	372 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	CWC25	Q9NXE8	425 aa	Predicted RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GFM2	Q969S9	779 aa	Known RBP	4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	ARHGAP6	O43182	974 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	TTC14	Q96N46	770 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	VIPAS39	Q9H9C1	493 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	GCK	P35557	465 aa		4.86	□□□□□ -1.63
MACF1-231	ENST00000564288	PNMA6A	P0CW24	399 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC77	Q9BR77	488 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	GNL3L	Q9NVN8	582 aa	Known RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	ERCC6L	Q2NKX8	1250 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	MLKL	Q8NB16	471 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	VCX3B	Q9H321	246 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	VCX3A	Q9NNX9	186 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CHMP4BP1	P59074	171 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	MSL1	Q68DK7	614 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	WASF1	Q92558	559 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CORO7	P57737	925 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	NDC80	O14777	642 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	KCNJ6	P48051	423 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	NLRP5	P59047	1200 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	BLM	P54132	1417 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	KIF1BP	Q96EK5	621 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CTTNBP2NL	Q9P2B4	639 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	SELENOO	Q9BVL4	669 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms