RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 NEURL1BA8MQ27 555 aa19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 F6X3S4 739 aa19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 TOMM70O94826 608 aa19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 HSP90B1P14625 803 aaKnown RBP19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 GRIPAP1Q4V328 841 aa19.9■□□□□ 0.78
AC009088.3-201ENST00000563605 PDE8AO60658 829 aa19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 VEGFAP15692 232 aaPredicted RBP19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 DPP8Q6V1X1 898 aaPredicted RBP19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 LARGE2Q8N3Y3 721 aa19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 MPNDQ8N594 471 aa19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 JDP2Q8WYK2 163 aa19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 SEC31BQ9NQW1 1179 aa19.89■□□□□ 0.77
AC009088.3-201ENST00000563605 UBE3BQ7Z3V4 1068 aa19.88■□□□□ 0.77
AC009088.3-201ENST00000563605 ZNF541Q9H0D2 1346 aa19.87■□□□□ 0.77
AC009088.3-201ENST00000563605 PPIP5K2O43314 1243 aa19.87■□□□□ 0.77
AC009088.3-201ENST00000563605 RPS8P62241 208 aaKnown RBP19.87■□□□□ 0.77
AC009088.3-201ENST00000563605 AOC3Q16853 763 aa19.87■□□□□ 0.77
AC009088.3-201ENST00000563605 CCDC152Q4G0S7 254 aa19.87■□□□□ 0.77
AC009088.3-201ENST00000563605 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
AC009088.3-201ENST00000563605 POTECB2RU33 542 aa19.86■□□□□ 0.77
AC009088.3-201ENST00000563605 GCKRQ14397 625 aa19.86■□□□□ 0.77
AC009088.3-201ENST00000563605 LINS1Q8NG48 757 aa19.86■□□□□ 0.77
AC009088.3-201ENST00000563605 NSFL1CQ9UNZ2 370 aaKnown RBP19.86■□□□□ 0.77
AC009088.3-201ENST00000563605 LAMB2P55268 1798 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 TIAM2Q8IVF5 1701 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 H7C1W4 665 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 SLC4A10Q6U841 1118 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 TMC4Q7Z404 712 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 GJA3Q9Y6H8 435 aa19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 DDX60Q8IY21 1712 aaKnown RBP19.85■□□□□ 0.77
AC009088.3-201ENST00000563605 CDHR2Q9BYE9 1310 aa19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 CTSWP56202 376 aa19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 EIF6P56537 245 aaKnown RBP19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 NIM1KQ8IY84 436 aa19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 RBM46Q8TBY0 533 aaKnown RBP19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 TAF1P21675 1872 aa19.84■□□□□ 0.77
AC009088.3-201ENST00000563605 FZD9O00144 591 aa19.83■□□□□ 0.77
AC009088.3-201ENST00000563605 GPSM2P81274 684 aa19.83■□□□□ 0.77
AC009088.3-201ENST00000563605 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.77
AC009088.3-201ENST00000563605 BCL2L13Q9BXK5 485 aa19.83■□□□□ 0.77
AC009088.3-201ENST00000563605 RTFDC1Q9BY42 306 aaPredicted RBP19.83■□□□□ 0.77
AC009088.3-201ENST00000563605 C6orf229H3BNL8 230 aa19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 HSPA6P17066 643 aa19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 BEND3Q5T5X7 828 aa19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 TTLL11Q8NHH1 800 aa19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 SSH1Q8WYL5 1049 aa19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 DICER1Q9UPY3 1922 aaKnown RBP19.82■□□□□ 0.76
AC009088.3-201ENST00000563605 RIMBP2O15034 1052 aa19.81■□□□□ 0.76
AC009088.3-201ENST00000563605 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
AC009088.3-201ENST00000563605 GREM2Q9H772 168 aa19.81■□□□□ 0.76
AC009088.3-201ENST00000563605 TRMT2AQ8IZ69 625 aaKnown RBP19.8■□□□□ 0.76
AC009088.3-201ENST00000563605 GPR101Q96P66 508 aaPredicted RBP19.8■□□□□ 0.76
AC009088.3-201ENST00000563605 ANKIB1Q9P2G1 1089 aa19.8■□□□□ 0.76
AC009088.3-201ENST00000563605 COL4A1P02462 1669 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 COL4A5P29400 1685 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 CASP7P55210 303 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 GPC2Q8N158 579 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 SMC1BQ8NDV3 1235 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 POLLQ9UGP5 575 aa19.79■□□□□ 0.76
AC009088.3-201ENST00000563605 IQCA1LA6NCM1 817 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 FSTL1Q12841 308 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 WASHC4Q2M389 1173 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 EAPPQ56P03 285 aaPredicted RBP19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 L3MBTL3Q96JM7 780 aaPredicted RBP19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 CDC5LQ99459 802 aaKnown RBP19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 SRCIN1Q9C0H9 1055 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 HACL1Q9UJ83 578 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 ZNRF3Q9ULT6 936 aa19.78■□□□□ 0.76
AC009088.3-201ENST00000563605 POTEIP0CG38 1075 aa19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 POTEJP0CG39 1038 aa19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 TBC1D16Q8TBP0 767 aa19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 SMC4Q9NTJ3 1288 aa19.77■□□□□ 0.76
AC009088.3-201ENST00000563605 RAD17O75943 681 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 CXCL9Q07325 125 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 DOK7Q18PE1 504 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 PLA2G12BQ9BX93 195 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 CHMP3Q9Y3E7 222 aa19.76■□□□□ 0.75
AC009088.3-201ENST00000563605 GRM8O00222 908 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 UFL1O94874 794 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 ITGA6P23229 1130 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 EPHX2P34913 555 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 FAM161AQ3B820 660 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 EYA3Q99504 573 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 GGA1Q9UJY5 639 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 WDR90Q96KV7 1748 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 CACNA1FO60840 1977 aa19.75■□□□□ 0.75
AC009088.3-201ENST00000563605 G3V3G9 751 aa19.74■□□□□ 0.75
AC009088.3-201ENST00000563605 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
AC009088.3-201ENST00000563605 CSF1RP07333 972 aa19.74■□□□□ 0.75
AC009088.3-201ENST00000563605 LMOD1P29536 600 aaPredicted RBP19.74■□□□□ 0.75
AC009088.3-201ENST00000563605 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms