RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 LRP5O75197 1615 aa23.48■■□□□ 1.35
FANCA-212ENST00000563513 TGFB2P61812 414 aa23.47■■□□□ 1.35
FANCA-212ENST00000563513 C2CD5Q86YS7 1000 aa23.47■■□□□ 1.35
FANCA-212ENST00000563513 CCDC85AQ96PX6 553 aaPredicted RBP23.47■■□□□ 1.35
FANCA-212ENST00000563513 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
FANCA-212ENST00000563513 A0A0G2JLW4 131 aa23.46■■□□□ 1.35
FANCA-212ENST00000563513 DPEP1P16444 411 aa23.46■■□□□ 1.35
FANCA-212ENST00000563513 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
FANCA-212ENST00000563513 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
FANCA-212ENST00000563513 CHMP4BQ9H444 224 aaKnown RBP23.46■■□□□ 1.35
FANCA-212ENST00000563513 GREM2Q9H772 168 aa23.46■■□□□ 1.35
FANCA-212ENST00000563513 HDAC5Q9UQL6 1122 aa23.46■■□□□ 1.35
FANCA-212ENST00000563513 SRCAPQ6ZRS2 3230 aa23.45■■□□□ 1.34
FANCA-212ENST00000563513 H0YIN7 160 aa23.45■■□□□ 1.34
FANCA-212ENST00000563513 NLGN2Q8NFZ4 835 aa23.45■■□□□ 1.34
FANCA-212ENST00000563513 PDZRN3Q9UPQ7 1066 aa23.45■■□□□ 1.34
FANCA-212ENST00000563513 MYH3P11055 1940 aa23.44■■□□□ 1.34
FANCA-212ENST00000563513 MTX1Q13505 466 aa23.44■■□□□ 1.34
FANCA-212ENST00000563513 CCDC152Q4G0S7 254 aa23.44■■□□□ 1.34
FANCA-212ENST00000563513 SYT17Q9BSW7 474 aa23.44■■□□□ 1.34
FANCA-212ENST00000563513 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
FANCA-212ENST00000563513 COL11A2P13942 1736 aaPredicted RBP23.44■■□□□ 1.34
FANCA-212ENST00000563513 RTL9Q8NET4 1388 aa23.43■■□□□ 1.34
FANCA-212ENST00000563513 NPR1P16066 1061 aa23.43■■□□□ 1.34
FANCA-212ENST00000563513 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
FANCA-212ENST00000563513 MASTLQ96GX5 879 aa23.43■■□□□ 1.34
FANCA-212ENST00000563513 COL4A1P02462 1669 aa23.42■■□□□ 1.34
FANCA-212ENST00000563513 ATP8B2P98198 1209 aa23.42■■□□□ 1.34
FANCA-212ENST00000563513 CEP85Q6P2H3 762 aa23.42■■□□□ 1.34
FANCA-212ENST00000563513 PNMA6EA0A0J9YXQ4 647 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 ITGA6P23229 1130 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 RFX5P48382 616 aaPredicted RBP23.41■■□□□ 1.34
FANCA-212ENST00000563513 STYK1Q6J9G0 422 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 SIRT2Q8IXJ6 389 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 RPGRQ92834 1020 aaKnown RBP23.41■■□□□ 1.34
FANCA-212ENST00000563513 RBM17Q96I25 401 aaKnown RBP23.41■■□□□ 1.34
FANCA-212ENST00000563513 CRAMP1Q96RY5 1269 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 PCDHB15Q9Y5E8 787 aa23.41■■□□□ 1.34
FANCA-212ENST00000563513 CELF1Q92879 486 aaKnown RBP23.4■■□□□ 1.34
FANCA-212ENST00000563513 ZNF622Q969S3 477 aaKnown RBP eCLIP23.4■■□□□ 1.34
FANCA-212ENST00000563513 CHMP3Q9Y3E7 222 aa23.4■■□□□ 1.34
FANCA-212ENST00000563513 TAF1P21675 1872 aa23.4■■□□□ 1.34
FANCA-212ENST00000563513 DDX46Q7L014 1031 aaKnown RBP23.39■■□□□ 1.33
FANCA-212ENST00000563513 IFIT5Q13325 482 aaKnown RBP23.38■■□□□ 1.33
FANCA-212ENST00000563513 POLA2Q14181 598 aa23.38■■□□□ 1.33
FANCA-212ENST00000563513 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
FANCA-212ENST00000563513 ZNF594Q96JF6 807 aaPredicted RBP23.38■■□□□ 1.33
FANCA-212ENST00000563513 DLEC1Q9Y238 1755 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 ANKRD18BA2A2Z9 1011 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 SRGAP3O43295 1099 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 ALDH1B1P30837 517 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 GRAPQ13588 217 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 AAMPQ13685 434 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 CCDC57Q2TAC2 916 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 GRAPLQ8TC17 118 aaPredicted RBP23.37■■□□□ 1.33
FANCA-212ENST00000563513 SSH3Q8TE77 659 aa23.37■■□□□ 1.33
FANCA-212ENST00000563513 RPS8P62241 208 aaKnown RBP23.36■■□□□ 1.33
FANCA-212ENST00000563513 PTPN12Q05209 780 aaKnown RBP23.36■■□□□ 1.33
FANCA-212ENST00000563513 KLHDC4Q8TBB5 520 aa23.36■■□□□ 1.33
FANCA-212ENST00000563513 CNKSR1Q969H4 720 aa23.36■■□□□ 1.33
FANCA-212ENST00000563513 PIM2Q9P1W9 311 aa23.36■■□□□ 1.33
FANCA-212ENST00000563513 SLC51AQ86UW1 340 aa23.35■■□□□ 1.33
FANCA-212ENST00000563513 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
FANCA-212ENST00000563513 BBOX1O75936 387 aa23.34■■□□□ 1.33
FANCA-212ENST00000563513 PRPF40BQ6NWY9 871 aaKnown RBP23.34■■□□□ 1.33
FANCA-212ENST00000563513 C7orf43Q8WVR3 580 aa23.34■■□□□ 1.33
FANCA-212ENST00000563513 CDC5LQ99459 802 aaKnown RBP23.34■■□□□ 1.33
FANCA-212ENST00000563513 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
FANCA-212ENST00000563513 ANKRD18AQ8IVF6 992 aa23.33■■□□□ 1.33
FANCA-212ENST00000563513 PUS3Q9BZE2 481 aaKnown RBP23.33■■□□□ 1.33
FANCA-212ENST00000563513 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
FANCA-212ENST00000563513 WWC3Q9ULE0 1092 aa23.33■■□□□ 1.33
FANCA-212ENST00000563513 PA2G4Q9UQ80 394 aaKnown RBP23.33■■□□□ 1.33
FANCA-212ENST00000563513 SLX4Q8IY92 1834 aa23.33■■□□□ 1.32
FANCA-212ENST00000563513 NEFLP07196 543 aa23.31■■□□□ 1.32
FANCA-212ENST00000563513 BSDC1Q9NW68 430 aaPredicted RBP23.31■■□□□ 1.32
FANCA-212ENST00000563513 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
FANCA-212ENST00000563513 IGHMBP2P38935 993 aaKnown RBP23.3■■□□□ 1.32
FANCA-212ENST00000563513 DALRD3Q5D0E6 543 aaKnown RBP23.3■■□□□ 1.32
FANCA-212ENST00000563513 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
FANCA-212ENST00000563513 RIPOR2Q9Y4F9 1068 aa23.3■■□□□ 1.32
FANCA-212ENST00000563513 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 TAF7LQ5H9L4 462 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 ATG9AQ7Z3C6 839 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 SP8Q8IXZ3 490 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
FANCA-212ENST00000563513 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
FANCA-212ENST00000563513 MPHOSPH8Q99549 860 aa23.28■■□□□ 1.32
FANCA-212ENST00000563513 MINPP1Q9UNW1 487 aa23.28■■□□□ 1.32
FANCA-212ENST00000563513 EYA2O00167 538 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 C21orf2O43822 256 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 TMC4Q7Z404 712 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 SIL1Q9H173 461 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 BCS1LQ9Y276 419 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 CACNA1SQ13698 1873 aa23.27■■□□□ 1.32
FANCA-212ENST00000563513 HMMRO75330 724 aa23.26■■□□□ 1.31
FANCA-212ENST00000563513 HDAC1Q13547 482 aaPredicted RBP23.26■■□□□ 1.31
FANCA-212ENST00000563513 ZNF219Q9P2Y4 722 aaPredicted RBP23.26■■□□□ 1.31
FANCA-212ENST00000563513 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms