RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 LINS1Q8NG48 757 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 NCAPD2Q15021 1401 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 EXOC5O00471 708 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 SMC2O95347 1197 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 TRDNQ13061 729 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 C16orf71Q8IYS4 520 aaPredicted RBP10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 HMGB1P09429 215 aaKnown RBP10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 STK38Q15208 465 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 ZSCAN16Q9H4T2 348 aaPredicted RBP10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 GDPD2Q9HCC8 539 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 STX1AQ16623 288 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 HSP90B2PQ58FF3 399 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 SIL1Q9H173 461 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 ECHDC1Q9NTX5 307 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 ZNF496Q96IT1 587 aaPredicted RBP10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 TTC41PQ6P2S7 1318 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 WDR17Q8IZU2 1322 aa10.66□□□□□ -0.7
CLUHP3-206ENST00000562354 STARD3NLO95772 234 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 ZNF165P49910 485 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 PRPF40BQ6NWY9 871 aaKnown RBP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 KRT222Q8N1A0 295 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 OGFRQ9NZT2 677 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 GRM8O00222 908 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 TOM1O60784 492 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 RALYLQ86SE5 291 aaKnown RBP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 PRDM10Q9NQV6 1147 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 DACH1Q9UI36 760 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 CWF19L2Q2TBE0 894 aaKnown RBP10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 AACSQ86V21 672 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 UBXN4Q92575 508 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
CLUHP3-206ENST00000562354 NPHP1O15259 732 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 BRD2P25440 801 aaKnown RBP10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 ME1P48163 572 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 VPS53Q5VIR6 699 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.71
CLUHP3-206ENST00000562354 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 TMCO3Q6UWJ1 677 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 ZNF142P52746 1687 aaPredicted RBP10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 RAD50Q92878 1312 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 GABPB1Q06547 395 aaPredicted RBP10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 USP44Q9H0E7 712 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 PIK3C2AO00443 1686 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 A0A087WZG4 1122 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 ZSCAN12O43309 604 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 CEP135Q66GS9 1140 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 CCAR2Q8N163 923 aaKnown RBP10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
CLUHP3-206ENST00000562354 ATP5J2-PTCD1G3V325 749 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 ERLIN1O75477 346 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 C16orf45Q96MC5 204 aaPredicted RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 GOLGA6L9A6NEM1 432 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 CUL4AQ13619 759 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 TSHZ3Q63HK5 1081 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 ZBTB3Q9H5J0 574 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 MAP4K4O95819 1239 aaPredicted RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 RGS12O14924 1447 aa10.63□□□□□ -0.71
CLUHP3-206ENST00000562354 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 NBPF7P0C2Y1 421 aaPredicted RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 TYRO3Q06418 890 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 LEKR1Q6ZMV7 388 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 UBE3BQ7Z3V4 1068 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CHD2O14647 1828 aaKnown RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CEMIPQ8WUJ3 1361 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 NALCNQ8IZF0 1738 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 ERVV-2B6SEH9 535 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 FAM193AP78312 1265 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CAMK4Q16566 473 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 BEND3Q5T5X7 828 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 ATL3Q6DD88 541 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CCDC186Q7Z3E2 898 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 FERMT3Q86UX7 667 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 GPT2Q8TD30 523 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms