RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 CRAMP1Q96RY5 1269 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 NTSR2O95665 410 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 CCT4P50991 539 aaKnown RBP7.17□□□□□ -1.26
LINC01963-201ENST00000562038 SF3B3Q15393 1217 aaKnown RBP7.17□□□□□ -1.26
LINC01963-201ENST00000562038 INTS3Q68E01 1043 aaKnown RBP7.17□□□□□ -1.26
LINC01963-201ENST00000562038 LINS1Q8NG48 757 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 VEGFBP49765 207 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 ECM29Q5VYK3 1845 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 CAPN2P17655 700 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 PARP3Q9Y6F1 533 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 TMEM88BA6NKF7 163 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 RARSP54136 660 aaKnown RBP7.16□□□□□ -1.26
LINC01963-201ENST00000562038 ST5P78524 1137 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
LINC01963-201ENST00000562038 LDHDQ86WU2 507 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 FAM9BQ8IZU0 186 aa7.16□□□□□ -1.26
LINC01963-201ENST00000562038 H7C1W4 665 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 PLA2G5P39877 138 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 MTX1Q13505 466 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 PDE3AQ14432 1141 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 ANKRD13DQ6ZTN6 518 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
LINC01963-201ENST00000562038 REM2Q8IYK8 340 aaPredicted RBP7.15□□□□□ -1.26
LINC01963-201ENST00000562038 ZBTB38Q8NAP3 1195 aaPredicted RBP7.15□□□□□ -1.26
LINC01963-201ENST00000562038 THUMPD2Q9BTF0 503 aaKnown RBP7.15□□□□□ -1.26
LINC01963-201ENST00000562038 CHPF2Q9P2E5 772 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 RRP7AQ9Y3A4 280 aaKnown RBP7.15□□□□□ -1.26
LINC01963-201ENST00000562038 CACNA1SQ13698 1873 aa7.15□□□□□ -1.26
LINC01963-201ENST00000562038 PTCD1O75127 700 aaKnown RBP7.15□□□□□ -1.27
LINC01963-201ENST00000562038 CASP7P55210 303 aa7.15□□□□□ -1.27
LINC01963-201ENST00000562038 FLIIQ13045 1269 aa7.15□□□□□ -1.27
LINC01963-201ENST00000562038 NFIXQ14938 502 aa7.15□□□□□ -1.27
LINC01963-201ENST00000562038 DDR1Q08345 913 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 RABL6Q3YEC7 729 aaPredicted RBP7.14□□□□□ -1.27
LINC01963-201ENST00000562038 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 NLRP10Q86W26 655 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 ABCC12Q96J65 1359 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 WDR33Q9C0J8 1336 aaKnown RBP7.14□□□□□ -1.27
LINC01963-201ENST00000562038 A1BGP04217 495 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 NPR1P16066 1061 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 ECE1P42892 770 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 TICAM2Q86XR7 235 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 SETDB2Q96T68 719 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 UTP14AQ9BVJ6 771 aaKnown RBP7.14□□□□□ -1.27
LINC01963-201ENST00000562038 RTFDC1Q9BY42 306 aaPredicted RBP7.14□□□□□ -1.27
LINC01963-201ENST00000562038 SPINK5Q9NQ38 1064 aaPredicted RBP7.14□□□□□ -1.27
LINC01963-201ENST00000562038 KCNA3P22001 575 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 BEND3Q5T5X7 828 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 C9orf131Q5VYM1 1079 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 XAGE3Q8WTP9 111 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 DNAAF4Q8WXU2 420 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 PRO3102Q9H379 93 aa7.14□□□□□ -1.27
LINC01963-201ENST00000562038 UBN2Q6ZU65 1347 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 CCDC85CA6NKD9 419 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 ITGBL1O95965 494 aaPredicted RBP7.13□□□□□ -1.27
LINC01963-201ENST00000562038 CSF1RP07333 972 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 NEXNQ0ZGT2 675 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 AMIGO3Q86WK7 504 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 PIAS4Q8N2W9 510 aaPredicted RBP7.13□□□□□ -1.27
LINC01963-201ENST00000562038 CNKSR1Q969H4 720 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 CWC25Q9NXE8 425 aaPredicted RBP7.13□□□□□ -1.27
LINC01963-201ENST00000562038 SH3TC1Q8TE82 1336 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 HTRA3P83110 453 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 PRR5LQ6MZQ0 368 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.13□□□□□ -1.27
LINC01963-201ENST00000562038 PRDM6Q9NQX0 595 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 COL2A1P02458 1487 aaPredicted RBP7.13□□□□□ -1.27
LINC01963-201ENST00000562038 SLX4Q8IY92 1834 aa7.13□□□□□ -1.27
LINC01963-201ENST00000562038 NEURL1BA8MQ27 555 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 SERPINB2P05120 415 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 ALDH1B1P30837 517 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 COPS6Q7L5N1 327 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 TSPYL6Q8N831 410 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 MASTLQ96GX5 879 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 PSMD1Q99460 953 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 RRAGCQ9HB90 399 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 DOCK2Q92608 1830 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 TAF1P21675 1872 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 PDS5AQ29RF7 1337 aaKnown RBP7.12□□□□□ -1.27
LINC01963-201ENST00000562038 TBC1D9BQ66K14 1250 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 CNBD1Q8NA66 436 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 CFHR5Q9BXR6 569 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 MYH13Q9UKX3 1938 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 MMP10P09238 476 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 COL4A1P02462 1669 aa7.12□□□□□ -1.27
LINC01963-201ENST00000562038 PDE8AO60658 829 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 BBOX1O75936 387 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 GCKRQ14397 625 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 TSR2Q969E8 191 aaKnown RBP7.11□□□□□ -1.27
LINC01963-201ENST00000562038 PRAMEF22A3QJZ6 481 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 CIAO1O76071 339 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 PROSER3Q2NL68 480 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 ZKSCAN2Q63HK3 967 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 ATF7IPQ6VMQ6 1270 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 SUPT20HQ8NEM7 779 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 C7orf43Q8WVR3 580 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 SSH1Q8WYL5 1049 aa7.11□□□□□ -1.27
LINC01963-201ENST00000562038 SRGNP10124 158 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms