RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ZBTB40Q9NUA8 1239 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 LAMB2P55268 1798 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 ABCC12Q96J65 1359 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 UBTFL1P0CB47 393 aaPredicted RBP14.57□□□□□ -0.08
HERC1-214ENST00000561400 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
HERC1-214ENST00000561400 CDHR2Q9BYE9 1310 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 GNAI3P08754 354 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 HCLS1P14317 486 aaPredicted RBP14.56□□□□□ -0.08
HERC1-214ENST00000561400 PTGER2P43116 358 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 SUCLG2Q96I99 432 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 TNRC6CQ9HCJ0 1690 aaKnown RBP14.56□□□□□ -0.08
HERC1-214ENST00000561400 IRS4O14654 1257 aaPredicted RBP14.56□□□□□ -0.08
HERC1-214ENST00000561400 C1orf115Q9H7X2 142 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 PRDM4Q9UKN5 801 aa14.56□□□□□ -0.08
HERC1-214ENST00000561400 NPHP1O15259 732 aa14.55□□□□□ -0.08
HERC1-214ENST00000561400 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
HERC1-214ENST00000561400 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
HERC1-214ENST00000561400 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
HERC1-214ENST00000561400 HSP90B1P14625 803 aaKnown RBP14.54□□□□□ -0.08
HERC1-214ENST00000561400 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
HERC1-214ENST00000561400 FOXO4P98177 505 aa14.54□□□□□ -0.08
HERC1-214ENST00000561400 GNAI2P04899 355 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 POLD1P28340 1107 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 PLA2G12BQ9BX93 195 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
HERC1-214ENST00000561400 SPON1Q9HCB6 807 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 PDE8AO60658 829 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 ST5P78524 1137 aa14.53□□□□□ -0.08
HERC1-214ENST00000561400 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.08
HERC1-214ENST00000561400 TAF1P21675 1872 aa14.52□□□□□ -0.08
HERC1-214ENST00000561400 ANKRD44Q8N8A2 993 aa14.52□□□□□ -0.08
HERC1-214ENST00000561400 CHRM1P11229 460 aaPredicted RBP14.51□□□□□ -0.09
HERC1-214ENST00000561400 RIC1Q4ADV7 1423 aa14.51□□□□□ -0.09
HERC1-214ENST00000561400 TEX2Q8IWB9 1127 aa14.51□□□□□ -0.09
HERC1-214ENST00000561400 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
HERC1-214ENST00000561400 RABL6Q3YEC7 729 aaPredicted RBP14.51□□□□□ -0.09
HERC1-214ENST00000561400 LMBR1LQ6UX01 489 aa14.51□□□□□ -0.09
HERC1-214ENST00000561400 TTLL11Q8NHH1 800 aa14.51□□□□□ -0.09
HERC1-214ENST00000561400 BRIP1Q9BX63 1249 aa14.51□□□□□ -0.09
HERC1-214ENST00000561400 C10orf71Q711Q0 1435 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 CSF1RP07333 972 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 CTSWP56202 376 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 NLRP3Q96P20 1036 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 CCDC85AQ96PX6 553 aaPredicted RBP14.5□□□□□ -0.09
HERC1-214ENST00000561400 HDAC5Q9UQL6 1122 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 COL11A2P13942 1736 aaPredicted RBP14.5□□□□□ -0.09
HERC1-214ENST00000561400 PCDHB15Q9Y5E8 787 aa14.5□□□□□ -0.09
HERC1-214ENST00000561400 FAM43AQ8N2R8 423 aa14.49□□□□□ -0.09
HERC1-214ENST00000561400 PNMA6EA0A0J9YXQ4 647 aa14.49□□□□□ -0.09
HERC1-214ENST00000561400 KLRG2A4D1S0 409 aaPredicted RBP14.49□□□□□ -0.09
HERC1-214ENST00000561400 SF3B3Q15393 1217 aaKnown RBP14.49□□□□□ -0.09
HERC1-214ENST00000561400 CEP85Q6P2H3 762 aa14.49□□□□□ -0.09
HERC1-214ENST00000561400 SIRT2Q8IXJ6 389 aa14.49□□□□□ -0.09
HERC1-214ENST00000561400 COL4A1P02462 1669 aa14.48□□□□□ -0.09
HERC1-214ENST00000561400 MTX1Q13505 466 aa14.48□□□□□ -0.09
HERC1-214ENST00000561400 CRY2Q49AN0 593 aa14.48□□□□□ -0.09
HERC1-214ENST00000561400 GREM2Q9H772 168 aa14.48□□□□□ -0.09
HERC1-214ENST00000561400 KIAA1551Q9HCM1 1747 aa14.48□□□□□ -0.09
HERC1-214ENST00000561400 FAM161AQ3B820 660 aa14.47□□□□□ -0.09
HERC1-214ENST00000561400 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
HERC1-214ENST00000561400 GOLGB1Q14789 3259 aaKnown RBP14.47□□□□□ -0.09
HERC1-214ENST00000561400 PDE6BP35913 854 aa14.47□□□□□ -0.09
HERC1-214ENST00000561400 ATP8B2P98198 1209 aa14.47□□□□□ -0.09
HERC1-214ENST00000561400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.09
HERC1-214ENST00000561400 SEC31BQ9NQW1 1179 aa14.47□□□□□ -0.09
HERC1-214ENST00000561400 CACNA1SQ13698 1873 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 SRGAP3O43295 1099 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 SRGNP10124 158 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 CCDC152Q4G0S7 254 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
HERC1-214ENST00000561400 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 SPEF2Q9C093 1822 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.09
HERC1-214ENST00000561400 CHRNA5P30532 468 aa14.46□□□□□ -0.1
HERC1-214ENST00000561400 RPAP2Q8IXW5 612 aaPredicted RBP14.46□□□□□ -0.1
HERC1-214ENST00000561400 RTL9Q8NET4 1388 aa14.45□□□□□ -0.1
HERC1-214ENST00000561400 ITGA6P23229 1130 aa14.45□□□□□ -0.1
HERC1-214ENST00000561400 RFX5P48382 616 aaPredicted RBP14.45□□□□□ -0.1
HERC1-214ENST00000561400 C2CD5Q86YS7 1000 aa14.45□□□□□ -0.1
HERC1-214ENST00000561400 KLHDC4Q8TBB5 520 aa14.45□□□□□ -0.1
HERC1-214ENST00000561400 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
HERC1-214ENST00000561400 HOXA10P31260 410 aaPredicted RBP14.44□□□□□ -0.1
HERC1-214ENST00000561400 IFIT5Q13325 482 aaKnown RBP14.44□□□□□ -0.1
HERC1-214ENST00000561400 POLA2Q14181 598 aa14.44□□□□□ -0.1
HERC1-214ENST00000561400 CCDC57Q2TAC2 916 aa14.44□□□□□ -0.1
HERC1-214ENST00000561400 RPGRQ92834 1020 aaKnown RBP14.44□□□□□ -0.1
HERC1-214ENST00000561400 ZNF594Q96JF6 807 aaPredicted RBP14.44□□□□□ -0.1
HERC1-214ENST00000561400 CD2APQ9Y5K6 639 aa14.44□□□□□ -0.1
HERC1-214ENST00000561400 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
HERC1-214ENST00000561400 H0YIN7 160 aa14.43□□□□□ -0.1
HERC1-214ENST00000561400 BRCA1P38398 1863 aaKnown RBP14.43□□□□□ -0.1
HERC1-214ENST00000561400 NPR1P16066 1061 aa14.43□□□□□ -0.1
HERC1-214ENST00000561400 DPEP1P16444 411 aa14.43□□□□□ -0.1
HERC1-214ENST00000561400 KCNA3P22001 575 aa14.43□□□□□ -0.1
HERC1-214ENST00000561400 PTPN12Q05209 780 aaKnown RBP14.43□□□□□ -0.1
HERC1-214ENST00000561400 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms