RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 BBOX1O75936 387 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 GCKRQ14397 625 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 RTKN2Q8IZC4 609 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
SNRPA1-214ENST00000560987 CACNA1SQ13698 1873 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 LMNB1P20700 586 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 CCDC152Q4G0S7 254 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
SNRPA1-214ENST00000560987 PTPRCP08575 1304 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 H7C1W4 665 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 GRAPQ13588 217 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 BEND3Q5T5X7 828 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 CC2D2BQ6DHV5 1058 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
SNRPA1-214ENST00000560987 ABCC4O15439 1325 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 NFKBIEO00221 500 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 TOMM70O94826 608 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 HSPA6P17066 643 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 RPS8P62241 208 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 SP8Q8IXZ3 490 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 MPNDQ8N594 471 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 SEC31BQ9NQW1 1179 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
SNRPA1-214ENST00000560987 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 CDHR2Q9BYE9 1310 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 CTSWP56202 376 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-214ENST00000560987 GRM8O00222 908 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 KIF3CO14782 793 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 BCAR3O75815 825 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 GABBR2O75899 941 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 DPP8Q6V1X1 898 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 JDP2Q8WYK2 163 aa11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 YTHDC1Q96MU7 727 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 API5Q9BZZ5 524 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 NSFL1CQ9UNZ2 370 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-214ENST00000560987 G3V3G9 751 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
SNRPA1-214ENST00000560987 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 IGHMBP2P38935 993 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 IARSP41252 1262 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 CCT4P50991 539 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 APLP1P51693 650 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 PRELPP51888 382 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 TAF7LQ5H9L4 462 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 PSMD1Q99460 953 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 MPHOSPH8Q99549 860 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 GREM2Q9H772 168 aa11.37□□□□□ -0.59
SNRPA1-214ENST00000560987 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 TAF1P21675 1872 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 RIMBP2O15034 1052 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 ITGA6P23229 1130 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 IFIT5Q13325 482 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 SLC51AQ86UW1 340 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 ARHGAP45Q92619 1136 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms