RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PDIA4P13667 645 aaKnown RBP19.34■□□□□ 0.69
TPM1-228ENST00000560975 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
TPM1-228ENST00000560975 AMPHP49418 695 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 ARHGAP29Q52LW3 1261 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 H2AFXP16104 143 aaPredicted RBP19.33■□□□□ 0.69
TPM1-228ENST00000560975 CYP2C19P33261 490 aa19.33■□□□□ 0.69
TPM1-228ENST00000560975 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.69
TPM1-228ENST00000560975 E4F1Q66K89 784 aaPredicted RBP19.33■□□□□ 0.68
TPM1-228ENST00000560975 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.68
TPM1-228ENST00000560975 ADCY9O60503 1353 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 HTATSF1O43719 755 aaKnown RBP19.32■□□□□ 0.68
TPM1-228ENST00000560975 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 BOLA2Q9H3K6 86 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 PNMA6AP0CW24 399 aaPredicted RBP19.32■□□□□ 0.68
TPM1-228ENST00000560975 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 PPP1R13BQ96KQ4 1090 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 FSD1Q9BTV5 496 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
TPM1-228ENST00000560975 PLA2G4AP47712 749 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 BEND3Q5T5X7 828 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 NEK11Q8NG66 645 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 DNAJC2Q99543 621 aaKnown RBP19.31■□□□□ 0.68
TPM1-228ENST00000560975 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 CFAP45Q9UL16 551 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.31■□□□□ 0.68
TPM1-228ENST00000560975 KINO60870 393 aaKnown RBP19.31■□□□□ 0.68
TPM1-228ENST00000560975 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 IPO4Q8TEX9 1081 aaKnown RBP19.31■□□□□ 0.68
TPM1-228ENST00000560975 CHPF2Q9P2E5 772 aa19.31■□□□□ 0.68
TPM1-228ENST00000560975 SMC2O95347 1197 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
TPM1-228ENST00000560975 TRIM34Q9BYJ4 488 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 ANO10Q9NW15 660 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 ZNF589Q86UQ0 364 aaPredicted RBP19.3■□□□□ 0.68
TPM1-228ENST00000560975 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 OVOS2A0A0J9YW53 1432 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 OVOS2Q6IE36 1432 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 KIF2AO00139 706 aaPredicted RBP19.3■□□□□ 0.68
TPM1-228ENST00000560975 TULP2O00295 520 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 CEP57L1Q8IYX8 460 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
TPM1-228ENST00000560975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■■□□ 19.1
TPM1-228ENST00000560975 CEP170BQ9Y4F5 1589 aaPredicted RBP19.29■□□□□ 0.68
TPM1-228ENST00000560975 L2HGDHQ9H9P8 463 aa19.29■□□□□ 0.68
TPM1-228ENST00000560975 TLR7Q9NYK1 1049 aaKnown RBP19.29■□□□□ 0.68
TPM1-228ENST00000560975 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.29■□□□□ 0.68
TPM1-228ENST00000560975 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
TPM1-228ENST00000560975 ADGRL3Q9HAR2 1447 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 CTAGE5O15320 804 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 SEC31AO94979 1220 aaKnown RBP19.28■□□□□ 0.68
TPM1-228ENST00000560975 GSDMDP57764 484 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 C9orf78Q9NZ63 289 aaPredicted RBP19.28■□□□□ 0.68
TPM1-228ENST00000560975 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 ARMCX5Q6P1M9 558 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 FSIP1Q8NA03 581 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
TPM1-228ENST00000560975 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
TPM1-228ENST00000560975 GUCY1B3Q02153 619 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 Q6ZUG5 572 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 XPO4Q9C0E2 1151 aaKnown RBP19.27■□□□□ 0.68
TPM1-228ENST00000560975 IFNKQ9P0W0 207 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 DNAI1Q9UI46 699 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
TPM1-228ENST00000560975 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
TPM1-228ENST00000560975 ME1P48163 572 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 TMCO3Q6UWJ1 677 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 EAF2Q96CJ1 260 aaPredicted RBP19.27■□□□□ 0.68
TPM1-228ENST00000560975 USP28Q96RU2 1077 aa19.27■□□□□ 0.68
TPM1-228ENST00000560975 UBXN4Q92575 508 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 SIL1Q9H173 461 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 ZSCAN16Q9H4T2 348 aaPredicted RBP19.26■□□□□ 0.67
TPM1-228ENST00000560975 ADD1P35611 737 aaKnown RBP19.26■□□□□ 0.67
TPM1-228ENST00000560975 CCDC93Q567U6 631 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 EPC1Q9H2F5 836 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 HIP1O00291 1037 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 SFPQP23246 707 aaKnown RBP eCLIP19.26■□□□□ 0.67
TPM1-228ENST00000560975 RAD51AP2Q09MP3 1159 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 SDF4Q9BRK5 362 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 CHMP4AQ9BY43 222 aa19.26■□□□□ 0.67
TPM1-228ENST00000560975 ZCCHC17Q9NP64 241 aaKnown RBP19.26■□□□□ 0.67
TPM1-228ENST00000560975 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 OSBPL5Q9H0X9 879 aaPredicted RBP19.25■□□□□ 0.67
TPM1-228ENST00000560975 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 KDRP35968 1356 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
TPM1-228ENST00000560975 BIN1O00499 593 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 ST5P78524 1137 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 USHBP1Q8N6Y0 703 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 FLT4P35916 1363 aa19.25■□□□□ 0.67
TPM1-228ENST00000560975 FAM193AP78312 1265 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 TEX35Q5T0J7 233 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 NAT10Q9H0A0 1025 aaKnown RBP19.24■□□□□ 0.67
TPM1-228ENST00000560975 RCOR1Q9UKL0 485 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms