RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 DOCK1Q14185 1865 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
ZEB1-219ENST00000560721 KCNB2Q92953 911 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 CCNL1Q9UK58 526 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-219ENST00000560721 FAM205AQ6ZU69 1335 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 MYO3BQ8WXR4 1341 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 ATAD5Q96QE3 1844 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 NBR1Q14596 966 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 USP44Q9H0E7 712 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 RAD50Q92878 1312 aa6.78□□□□□ -1.32
ZEB1-219ENST00000560721 GRM8O00222 908 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 ADAMTS2O95450 1211 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 TMEM132AQ24JP5 1023 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 SP8Q8IXZ3 490 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 BSDC1Q9NW68 430 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-219ENST00000560721 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-219ENST00000560721 PDE6BP35913 854 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 ANKRD2Q9GZV1 360 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 ALDH8A1Q9H2A2 487 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-219ENST00000560721 STRN4Q9NRL3 753 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 ROBO3Q96MS0 1386 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 FBLN1P23142 703 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 ARID4AP29374 1257 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-219ENST00000560721 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 TSPYL6Q8N831 410 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 SUPT20HQ8NEM7 779 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 FAM163AQ96GL9 167 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-219ENST00000560721 KAZALD1Q96I82 304 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 UBN2Q6ZU65 1347 aa6.77□□□□□ -1.33
ZEB1-219ENST00000560721 HMMRO75330 724 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 NPR1P16066 1061 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 PTGER2P43116 358 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 WDR19Q8NEZ3 1342 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 GNAI2P04899 355 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 NEXNQ0ZGT2 675 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 DNAJC10Q8IXB1 793 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 CLUAP1Q96AJ1 413 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 UTP14AQ9BVJ6 771 aaKnown RBP6.76□□□□□ -1.33
ZEB1-219ENST00000560721 CHPF2Q9P2E5 772 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 MYH15Q9Y2K3 1946 aa6.76□□□□□ -1.33
ZEB1-219ENST00000560721 NUCB1Q02818 461 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 C8orf34Q49A92 452 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 CEP85Q6P2H3 762 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 USP16Q9Y5T5 823 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 IL1R1P14778 569 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 CAPN2P17655 700 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 UBE4AQ14139 1066 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 RTL5Q5HYW3 569 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-219ENST00000560721 CCDC146Q8IYE0 955 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 PLIN1O60240 522 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 CTSWP56202 376 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 FKBP1CQ5VVH2 108 aa6.75□□□□□ -1.33
ZEB1-219ENST00000560721 ARHGEF1Q92888 912 aaKnown RBP6.75□□□□□ -1.33
ZEB1-219ENST00000560721 NOB1Q9ULX3 412 aaKnown RBP6.75□□□□□ -1.33
ZEB1-219ENST00000560721 ALDH1B1P30837 517 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 IL15P40933 162 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-219ENST00000560721 ZNF827Q17R98 1081 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 C20orf194Q5TEA3 1177 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
ZEB1-219ENST00000560721 DZIP3Q86Y13 1208 aaKnown RBP6.74□□□□□ -1.33
ZEB1-219ENST00000560721 RIPOR2Q9Y4F9 1068 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 PLIN4Q96Q06 1357 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 PCP11498 1178 aaKnown RBP6.74□□□□□ -1.33
ZEB1-219ENST00000560721 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 GRAPQ13588 217 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 GIMAP6Q6P9H5 292 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 GRAPLQ8TC17 118 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-219ENST00000560721 PGAP2Q9UHJ9 254 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 ZBTB1Q9Y2K1 713 aa6.74□□□□□ -1.33
ZEB1-219ENST00000560721 OTOFQ9HC10 1997 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 SENP3-EIF4A1A0A087X0R7 540 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 KCNQ3O43525 872 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 SLC4A2P04920 1241 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 MASTLQ96GX5 879 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 FRMPD3Q5JV73 1810 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 PITPNM2Q9BZ72 1349 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 MYH8P13535 1937 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-219ENST00000560721 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-219ENST00000560721 NOVP48745 357 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 TSGA10IPQ3SY00 556 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 TPTE2Q6XPS3 522 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 NUTM2AQ8IVF1 878 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-219ENST00000560721 ZBED3Q96IU2 234 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-219ENST00000560721 RWDD1Q9H446 243 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-219ENST00000560721 AKAP2Q9Y2D5 859 aa6.73□□□□□ -1.33
ZEB1-219ENST00000560721 ATP2B4P23634 1241 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 CNKSR1Q969H4 720 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
ZEB1-219ENST00000560721 SMC4Q9NTJ3 1288 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms