RNA–Protein interactions for RNA: ENST00000560176.1

AC012409.1-201, humanhuman

TSL 3 BASIC

Gene AC012409.1, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-201ENST00000560176 VPS37DQ86XT2 251 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 GLYCTKQ8IVS8 523 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 RASEFQ8IZ41 740 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 MYO1HQ8N1T3 1032 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 JARID2Q92833 1246 aaPredicted RBP5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 SKA1Q96BD8 255 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 CENPTQ96BT3 561 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 TBC1D20Q96BZ9 403 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 ZNF594Q96JF6 807 aaPredicted RBP5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 GPR101Q96P66 508 aaPredicted RBP5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 MAP3K14Q99558 947 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 XPO4Q9C0E2 1151 aaKnown RBP5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 NBPF3Q9H094 633 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 MRS2Q9HD23 443 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 ANO2Q9NQ90 1003 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 CNTN3Q9P232 1028 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 PGAP2Q9UHJ9 254 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 NUP160Q12769 1436 aa5.53□□□□□ -1.52
AC012409.1-201ENST00000560176 SNAPC4Q5SXM2 1469 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 MAGI1Q96QZ7 1491 aaPredicted RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 KIF1CO43896 1103 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 KIF5CO60282 957 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 RPL17P18621 184 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 TRPC1P48995 793 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 SLC20A2Q08357 652 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 DIXDC1Q155Q3 683 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 ECM1Q16610 540 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 CCDC158Q5M9N0 1113 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 TSHZ3Q63HK5 1081 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 ALKBH2Q6NS38 261 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 C16orf54Q6UWD8 224 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 OTUD6AQ7L8S5 288 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 DZIP3Q86Y13 1208 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 JAMLQ86YT9 394 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 BRSK2Q8IWQ3 736 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 CPXCR1Q8N123 301 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 ARL6IP6Q8N6S5 226 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 C1orf216Q8TAB5 229 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 NELL1Q92832 810 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 NUDT16Q96DE0 195 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 PGBD4Q96DM1 585 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 SRPK1Q96SB4 655 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 POLR3CQ9BUI4 534 aaPredicted RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 KANSL2Q9H9L4 492 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 SUN2Q9UH99 717 aa5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 CDV3Q9UKY7 258 aaKnown RBP5.52□□□□□ -1.53
AC012409.1-201ENST00000560176 SHTN1A0MZ66 631 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 GTPBP10A4D1E9 387 aaKnown RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 ERICH4A6NGS2 130 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 VGLL3A8MV65 326 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 MAP3K7O43318 606 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 SORBS3O60504 671 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 PTGDRQ13258 359 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 TUSC1Q2TAM9 212 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 PPP1R15BQ5SWA1 713 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 PRPF38BQ5VTL8 546 aaKnown RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 JAKMIP3Q5VZ66 844 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 CFAP161Q6P656 301 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 TMC4Q7Z404 712 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 RIC3Q7Z5B4 369 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 RASSF3Q86WH2 238 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 SNX32Q86XE0 403 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 PLPP6Q8IY26 295 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 ZNF654Q8IZM8 581 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 STK11IPQ8N1F8 1099 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 MIGA1Q8NAN2 632 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 APPL2Q8NEU8 664 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 RPGRQ92834 1020 aaKnown RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 MPP4Q96JB8 637 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 TSPY26PQ9H489 355 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 STK26Q9P289 416 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 VTI1BQ9UEU0 232 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 DDX41Q9UJV9 622 aaKnown RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 RBM19Q9Y4C8 960 aaKnown RBP5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 SYNJ2O15056 1496 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 GRIN2AQ12879 1464 aa5.51□□□□□ -1.53
AC012409.1-201ENST00000560176 CEP170Q5SW79 1584 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 FAM196BA6NMK8 535 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L15C9J2P7 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 C19orf81C9J6K1 198 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L10C9JJH3 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L13C9JLJ4 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 C11orf95C9JLR9 678 aaPredicted RBP5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L12C9JPN9 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L11C9JVI0 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L21D6R901 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L18D6R9N7 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L22D6RA61 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L17D6RBQ6 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L19D6RCP7 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 USP17L20D6RJB6 530 aa5.5□□□□□ -1.53
AC012409.1-201ENST00000560176 hCG_1984214I3L0E3 225 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms