RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
USP3-215ENST00000559771 ADCY9O60503 1353 aa8.02□□□□□ -1.13
USP3-215ENST00000559771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
USP3-215ENST00000559771 SLC10A3P09131 477 aa8.02□□□□□ -1.13
USP3-215ENST00000559771 VSIG8P0DPA2 414 aa8.02□□□□□ -1.13
USP3-215ENST00000559771 TNNT2P45379 298 aaPredicted RBP8.02□□□□□ -1.13
USP3-215ENST00000559771 FLAD1Q8NFF5 587 aa8.02□□□□□ -1.13
USP3-215ENST00000559771 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
USP3-215ENST00000559771 C4AP0C0L4 1744 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 MYH14Q7Z406 1995 aaKnown RBP8.01□□□□□ -1.13
USP3-215ENST00000559771 HSPA5P11021 654 aaKnown RBP8.01□□□□□ -1.13
USP3-215ENST00000559771 SSFA2P28290 1259 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 KMT5BQ4FZB7 885 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 AK7Q96M32 723 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 PANK3Q9H999 370 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 TMOD3Q9NYL9 352 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 ADAMTS7Q9UKP4 1686 aa8.01□□□□□ -1.13
USP3-215ENST00000559771 CICQ96RK0 1608 aaPredicted RBP8□□□□□ -1.13
USP3-215ENST00000559771 N4BP2Q86UW6 1770 aaPredicted RBP8□□□□□ -1.13
USP3-215ENST00000559771 SENP3-EIF4A1A0A087X0R7 540 aa8□□□□□ -1.13
USP3-215ENST00000559771 GRIN3BO60391 1043 aa8□□□□□ -1.13
USP3-215ENST00000559771 ATP6V1AP38606 617 aa8□□□□□ -1.13
USP3-215ENST00000559771 GPAT2Q6NUI2 795 aa8□□□□□ -1.13
USP3-215ENST00000559771 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
USP3-215ENST00000559771 ATP10DQ9P241 1426 aa8□□□□□ -1.13
USP3-215ENST00000559771 TJP1Q07157 1748 aa8□□□□□ -1.13
USP3-215ENST00000559771 BRCA1P38398 1863 aaKnown RBP8□□□□□ -1.13
USP3-215ENST00000559771 GNPATO15228 680 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 FAM160A2Q8N612 972 aaPredicted RBP7.99□□□□□ -1.13
USP3-215ENST00000559771 PCGF6Q9BYE7 350 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 TMEM134Q9H6X4 195 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 SCN11AQ9UI33 1791 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 PXDNLA1KZ92 1463 aa7.99□□□□□ -1.13
USP3-215ENST00000559771 ERVV-2B6SEH9 535 aa7.98□□□□□ -1.13
USP3-215ENST00000559771 GIGYF1O75420 1035 aaPredicted RBP7.98□□□□□ -1.13
USP3-215ENST00000559771 BMP1P13497 986 aa7.98□□□□□ -1.13
USP3-215ENST00000559771 EIF4G2P78344 907 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP3-215ENST00000559771 PUS10Q3MIT2 529 aaKnown RBP7.98□□□□□ -1.13
USP3-215ENST00000559771 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
USP3-215ENST00000559771 POLR3GLQ9BT43 218 aa7.98□□□□□ -1.13
USP3-215ENST00000559771 VIRMAQ69YN4 1812 aaKnown RBP7.98□□□□□ -1.13
USP3-215ENST00000559771 C10orf71Q711Q0 1435 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 GRXCR2A6NFK2 248 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 SPDYE16A6NNV3 312 aaPredicted RBP7.97□□□□□ -1.13
USP3-215ENST00000559771 MMP10P09238 476 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
USP3-215ENST00000559771 IL13P35225 146 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 ARHGEF1Q92888 912 aaKnown RBP7.97□□□□□ -1.13
USP3-215ENST00000559771 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 CNTNAP4Q9C0A0 1308 aa7.97□□□□□ -1.13
USP3-215ENST00000559771 GYS1P13807 737 aa7.96□□□□□ -1.14
USP3-215ENST00000559771 PLEKHO1Q53GL0 409 aaPredicted RBP7.96□□□□□ -1.14
USP3-215ENST00000559771 RC3H1Q5TC82 1133 aaKnown RBP7.96□□□□□ -1.14
USP3-215ENST00000559771 ZNF530Q6P9A1 599 aaPredicted RBP7.96□□□□□ -1.14
USP3-215ENST00000559771 RPS6KA4O75676 772 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 IGHA1P01876 353 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 KCNA3P22001 575 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 AMOTQ4VCS5 1084 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 TRAPPC3LQ5T215 181 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 ADAMTS8Q9UP79 889 aa7.95□□□□□ -1.14
USP3-215ENST00000559771 RTCBQ9Y3I0 505 aaKnown RBP7.95□□□□□ -1.14
USP3-215ENST00000559771 MRC1P22897 1456 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 KCPQ6ZWJ8 1503 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 PER1O15534 1290 aaPredicted RBP7.94□□□□□ -1.14
USP3-215ENST00000559771 HSP90AB1P08238 724 aaKnown RBP7.94□□□□□ -1.14
USP3-215ENST00000559771 DNAJB2P25686 324 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 MTHFSP49914 203 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 CABP4P57796 275 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 SULT6B1Q6IMI4 303 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
USP3-215ENST00000559771 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 NLGN1Q8N2Q7 840 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 LGR6Q9HBX8 967 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 PRDM9Q9NQV7 894 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 UBR2Q8IWV8 1755 aa7.94□□□□□ -1.14
USP3-215ENST00000559771 ADAM23O75077 832 aa7.93□□□□□ -1.14
USP3-215ENST00000559771 PTCD1O75127 700 aaKnown RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 DPEP1P16444 411 aa7.93□□□□□ -1.14
USP3-215ENST00000559771 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 TGFB2P61812 414 aa7.93□□□□□ -1.14
USP3-215ENST00000559771 DDR1Q08345 913 aa7.93□□□□□ -1.14
USP3-215ENST00000559771 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 GPBP1L1Q9HC44 474 aaPredicted RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 SRP68Q9UHB9 627 aaKnown RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 DNMT3AQ9Y6K1 912 aaPredicted RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
USP3-215ENST00000559771 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
USP3-215ENST00000559771 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
USP3-215ENST00000559771 USP42Q9H9J4 1324 aaKnown RBP7.92□□□□□ -1.14
USP3-215ENST00000559771 SIPA1L3O60292 1781 aaPredicted RBP7.92□□□□□ -1.14
USP3-215ENST00000559771 TM4SF1P30408 202 aa7.91□□□□□ -1.14
USP3-215ENST00000559771 RFC4P35249 363 aa7.91□□□□□ -1.14
USP3-215ENST00000559771 TRIM32Q13049 653 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms