RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 PPEF1O14829 653 aaPredicted RBP27.94■■■□□ 2.06
CRNDE-203ENST00000557792 SLC4A2P04920 1241 aa27.94■■■□□ 2.06
CRNDE-203ENST00000557792 GRIPAP1Q4V328 841 aa27.94■■■□□ 2.06
CRNDE-203ENST00000557792 ZNF521Q96K83 1311 aa27.93■■■□□ 2.06
CRNDE-203ENST00000557792 DDX58O95786 925 aaKnown RBP27.93■■■□□ 2.06
CRNDE-203ENST00000557792 ITGBL1O95965 494 aaPredicted RBP27.93■■■□□ 2.06
CRNDE-203ENST00000557792 FAM89AQ96GI7 184 aa27.93■■■□□ 2.06
CRNDE-203ENST00000557792 CLEC11AQ9Y240 323 aa27.93■■■□□ 2.06
CRNDE-203ENST00000557792 ANKRD36CQ5JPF3 1778 aa27.93■■■□□ 2.06
CRNDE-203ENST00000557792 G2E3Q7L622 706 aa27.92■■■□□ 2.06
CRNDE-203ENST00000557792 MYD88Q99836 296 aa27.92■■■□□ 2.06
CRNDE-203ENST00000557792 MYH16Q9H6N6 1097 aa27.92■■■□□ 2.06
CRNDE-203ENST00000557792 EIF6P56537 245 aaKnown RBP27.91■■■□□ 2.06
CRNDE-203ENST00000557792 PNMA8AQ86V59 439 aaPredicted RBP27.91■■■□□ 2.06
CRNDE-203ENST00000557792 METTL22Q9BUU2 404 aaPredicted RBP27.91■■■□□ 2.06
CRNDE-203ENST00000557792 CNTNAP1P78357 1384 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 PI4KAP2A4QPH2 592 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 RTL5Q5HYW3 569 aaPredicted RBP27.9■■■□□ 2.06
CRNDE-203ENST00000557792 KSR2Q6VAB6 950 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 TNS4Q8IZW8 715 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 PI4KAP1Q8N8J0 262 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 MAP3K2Q9Y2U5 619 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 GJA3Q9Y6H8 435 aa27.9■■■□□ 2.06
CRNDE-203ENST00000557792 LARGE2Q8N3Y3 721 aa27.89■■■□□ 2.06
CRNDE-203ENST00000557792 LAMB2P55268 1798 aa27.88■■■□□ 2.05
CRNDE-203ENST00000557792 TMEM88BA6NKF7 163 aa27.88■■■□□ 2.05
CRNDE-203ENST00000557792 LTBP1Q14766 1721 aa27.88■■■□□ 2.05
CRNDE-203ENST00000557792 MAP1SQ66K74 1059 aaPredicted RBP27.87■■■□□ 2.05
CRNDE-203ENST00000557792 CCDC191Q8NCU4 936 aa27.87■■■□□ 2.05
CRNDE-203ENST00000557792 ATP6V0A2Q9Y487 856 aa27.87■■■□□ 2.05
CRNDE-203ENST00000557792 CNTROBQ8N137 903 aa27.86■■■□□ 2.05
CRNDE-203ENST00000557792 ZBTB38Q8NAP3 1195 aaPredicted RBP27.86■■■□□ 2.05
CRNDE-203ENST00000557792 ABCC4O15439 1325 aa27.86■■■□□ 2.05
CRNDE-203ENST00000557792 IRS4O14654 1257 aaPredicted RBP27.85■■■□□ 2.05
CRNDE-203ENST00000557792 LMOD1P29536 600 aaPredicted RBP27.84■■■□□ 2.05
CRNDE-203ENST00000557792 SCNN1DP51172 638 aa27.84■■■□□ 2.05
CRNDE-203ENST00000557792 FLIIQ13045 1269 aa27.84■■■□□ 2.05
CRNDE-203ENST00000557792 DDX46Q7L014 1031 aaKnown RBP27.84■■■□□ 2.05
CRNDE-203ENST00000557792 NIM1KQ8IY84 436 aa27.84■■■□□ 2.05
CRNDE-203ENST00000557792 TMX4Q9H1E5 349 aaPredicted RBP27.84■■■□□ 2.05
CRNDE-203ENST00000557792 CWC25Q9NXE8 425 aaPredicted RBP27.84■■■□□ 2.05
CRNDE-203ENST00000557792 PPIP5K2O43314 1243 aa27.83■■■□□ 2.05
CRNDE-203ENST00000557792 BBOX1O75936 387 aa27.83■■■□□ 2.05
CRNDE-203ENST00000557792 IGKV5-2P06315 115 aa27.83■■■□□ 2.05
CRNDE-203ENST00000557792 SF3B3Q15393 1217 aaKnown RBP27.83■■■□□ 2.05
CRNDE-203ENST00000557792 DIEXFQ68CQ4 756 aaKnown RBP27.83■■■□□ 2.05
CRNDE-203ENST00000557792 JARID2Q92833 1246 aaPredicted RBP27.83■■■□□ 2.05
CRNDE-203ENST00000557792 PCCAP05165 728 aaPredicted RBP27.82■■■□□ 2.04
CRNDE-203ENST00000557792 AOC3Q16853 763 aa27.82■■■□□ 2.04
CRNDE-203ENST00000557792 EPS15P42566 896 aa27.81■■■□□ 2.04
CRNDE-203ENST00000557792 VEGFBP49765 207 aa27.81■■■□□ 2.04
CRNDE-203ENST00000557792 VPS33BQ9H267 617 aa27.81■■■□□ 2.04
CRNDE-203ENST00000557792 CAPN15O75808 1086 aa27.8■■■□□ 2.04
CRNDE-203ENST00000557792 NEXNQ0ZGT2 675 aa27.8■■■□□ 2.04
CRNDE-203ENST00000557792 GRAPQ13588 217 aa27.8■■■□□ 2.04
CRNDE-203ENST00000557792 GRAPLQ8TC17 118 aaPredicted RBP27.8■■■□□ 2.04
CRNDE-203ENST00000557792 TAF1P21675 1872 aa27.79■■■□□ 2.04
CRNDE-203ENST00000557792 FKBP5Q13451 457 aaPredicted RBP27.79■■■□□ 2.04
CRNDE-203ENST00000557792 CWF19L2Q2TBE0 894 aaKnown RBP27.79■■■□□ 2.04
CRNDE-203ENST00000557792 MIER1Q8N108 512 aa27.79■■■□□ 2.04
CRNDE-203ENST00000557792 RTFDC1Q9BY42 306 aaPredicted RBP27.79■■■□□ 2.04
CRNDE-203ENST00000557792 E9PSI1 815 aa27.78■■■□□ 2.04
CRNDE-203ENST00000557792 SP8Q8IXZ3 490 aa27.78■■■□□ 2.04
CRNDE-203ENST00000557792 SUPT20HQ8NEM7 779 aa27.78■■■□□ 2.04
CRNDE-203ENST00000557792 NEURL1BA8MQ27 555 aa27.77■■■□□ 2.04
CRNDE-203ENST00000557792 FOXN1O15353 648 aa27.77■■■□□ 2.04
CRNDE-203ENST00000557792 SLFN5Q08AF3 891 aa27.77■■■□□ 2.04
CRNDE-203ENST00000557792 DPP8Q6V1X1 898 aaPredicted RBP27.77■■■□□ 2.04
CRNDE-203ENST00000557792 RASSF10A6NK89 507 aa27.76■■■□□ 2.03
CRNDE-203ENST00000557792 HSP90B1P14625 803 aaKnown RBP27.76■■■□□ 2.03
CRNDE-203ENST00000557792 USP50Q70EL3 339 aaPredicted RBP27.76■■■□□ 2.03
CRNDE-203ENST00000557792 DNAAF4Q8WXU2 420 aa27.76■■■□□ 2.03
CRNDE-203ENST00000557792 CELF1Q92879 486 aaKnown RBP27.76■■■□□ 2.03
CRNDE-203ENST00000557792 CDCA7LQ96GN5 454 aa27.76■■■□□ 2.03
CRNDE-203ENST00000557792 ZNRF3Q9ULT6 936 aa27.76■■■□□ 2.03
CRNDE-203ENST00000557792 DDX60Q8IY21 1712 aaKnown RBP27.75■■■□□ 2.03
CRNDE-203ENST00000557792 CXCL9Q07325 125 aa27.75■■■□□ 2.03
CRNDE-203ENST00000557792 MPNDQ8N594 471 aa27.75■■■□□ 2.03
CRNDE-203ENST00000557792 PDE8AO60658 829 aa27.74■■■□□ 2.03
CRNDE-203ENST00000557792 DEFB115Q30KQ5 88 aa27.74■■■□□ 2.03
CRNDE-203ENST00000557792 GPRC5DQ9NZD1 345 aa27.74■■■□□ 2.03
CRNDE-203ENST00000557792 FMR1Q06787 632 aaKnown RBP eCLIP27.73■■■□□ 2.03
CRNDE-203ENST00000557792 ABT1Q9ULW3 272 aaKnown RBP27.73■■■□□ 2.03
CRNDE-203ENST00000557792 CDHR2Q9BYE9 1310 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 H7C1W4 665 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 KIAA2012Q0VF49 1180 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 TMC4Q7Z404 712 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 SEC31BQ9NQW1 1179 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 TRPM7Q96QT4 1865 aa27.72■■■□□ 2.03
CRNDE-203ENST00000557792 LRRC37AA6NMS7 1700 aa27.71■■■□□ 2.03
CRNDE-203ENST00000557792 F6X3S4 739 aa27.71■■■□□ 2.03
CRNDE-203ENST00000557792 RPS8P62241 208 aaKnown RBP27.71■■■□□ 2.03
CRNDE-203ENST00000557792 GCKRQ14397 625 aa27.71■■■□□ 2.03
CRNDE-203ENST00000557792 LINS1Q8NG48 757 aa27.71■■■□□ 2.03
CRNDE-203ENST00000557792 AIDAQ96BJ3 306 aa27.71■■■□□ 2.03
CRNDE-203ENST00000557792 ADARB2Q9NS39 739 aaKnown RBP27.71■■■□□ 2.03
CRNDE-203ENST00000557792 CCDC85AQ96PX6 553 aaPredicted RBP27.7■■■□□ 2.02
CRNDE-203ENST00000557792 WBP1LQ9NX94 342 aa27.7■■■□□ 2.02
CRNDE-203ENST00000557792 DUOX1Q9NRD9 1551 aa27.69■■■□□ 2.02
CRNDE-203ENST00000557792 GMPSP49915 693 aaPredicted RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms