RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ZBTB7BO15156 539 aaPredicted RBP17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 PLIN1O60240 522 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 GNAI2P04899 355 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 DDX46Q7L014 1031 aaKnown RBP17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
SUPT16H-208ENST00000557652 BBOX1O75936 387 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 DPEP1P16444 411 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 TTLL6Q8N841 843 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 MEIS3Q99687 375 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
SUPT16H-208ENST00000557652 KCNA3P22001 575 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 FOXO4P98177 505 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 MTX1Q13505 466 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 SLX4Q8IY92 1834 aa17.67■□□□□ 0.42
SUPT16H-208ENST00000557652 A0A0G2JLW4 131 aa17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 GRAPQ13588 217 aa17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 GRAPLQ8TC17 118 aaPredicted RBP17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
SUPT16H-208ENST00000557652 TAF1P21675 1872 aa17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 LRRC37AA6NMS7 1700 aa17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 CHRNA5P30532 468 aa17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 ZNF622Q969S3 477 aaKnown RBP eCLIP17.65■□□□□ 0.424e-7■■■□□ 17.9
SUPT16H-208ENST00000557652 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
SUPT16H-208ENST00000557652 ANKRD18BA2A2Z9 1011 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 TMX4Q9H1E5 349 aaPredicted RBP17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 ZBTB40Q9NUA8 1239 aa17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
SUPT16H-208ENST00000557652 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
SUPT16H-208ENST00000557652 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SUPT16H-208ENST00000557652 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
SUPT16H-208ENST00000557652 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
SUPT16H-208ENST00000557652 ITGA6P23229 1130 aa17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 RPAP2Q8IXW5 612 aaPredicted RBP17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 GREM2Q9H772 168 aa17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
SUPT16H-208ENST00000557652 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
SUPT16H-208ENST00000557652 IGHMBP2P38935 993 aaKnown RBP17.61■□□□□ 0.41
SUPT16H-208ENST00000557652 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
SUPT16H-208ENST00000557652 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
SUPT16H-208ENST00000557652 BSDC1Q9NW68 430 aaPredicted RBP17.61■□□□□ 0.41
SUPT16H-208ENST00000557652 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
SUPT16H-208ENST00000557652 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
SUPT16H-208ENST00000557652 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
SUPT16H-208ENST00000557652 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 HMMRO75330 724 aa17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 TAF7LQ5H9L4 462 aa17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
SUPT16H-208ENST00000557652 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 COPRSQ9NQ92 184 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 BCS1LQ9Y276 419 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 CHD4Q14839 1912 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 A0A1B0GUL6 1792 aa17.58■□□□□ 0.4
SUPT16H-208ENST00000557652 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 CELF1Q92879 486 aaKnown RBP17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 SRCAPQ6ZRS2 3230 aa17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
SUPT16H-208ENST00000557652 LTBP3Q9NS15 1303 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 CIAO1O76071 339 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 POLA2Q14181 598 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 ANKRD2Q9GZV1 360 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 VPS33BQ9H267 617 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 SBF1O95248 1867 aa17.56■□□□□ 0.4
SUPT16H-208ENST00000557652 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 GPR162Q16538 588 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 LDHAL6AQ6ZMR3 332 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 SUPT20HQ8NEM7 779 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
SUPT16H-208ENST00000557652 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms