RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-214ENST00000557490 NFKBIEO00221 500 aa20.23■□□□□ 0.83
TUBB3-214ENST00000557490 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-214ENST00000557490 MLLT1Q03111 559 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-214ENST00000557490 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
TUBB3-214ENST00000557490 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
TUBB3-214ENST00000557490 DNAAF4Q8WXU2 420 aa20.23■□□□□ 0.83
TUBB3-214ENST00000557490 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
TUBB3-214ENST00000557490 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
TUBB3-214ENST00000557490 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
TUBB3-214ENST00000557490 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
TUBB3-214ENST00000557490 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
TUBB3-214ENST00000557490 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
TUBB3-214ENST00000557490 IGKV5-2P06315 115 aa20.21■□□□□ 0.83
TUBB3-214ENST00000557490 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
TUBB3-214ENST00000557490 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
TUBB3-214ENST00000557490 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
TUBB3-214ENST00000557490 NEURL1BA8MQ27 555 aa20.2■□□□□ 0.82
TUBB3-214ENST00000557490 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-214ENST00000557490 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
TUBB3-214ENST00000557490 WBP1LQ9NX94 342 aa20.2■□□□□ 0.82
TUBB3-214ENST00000557490 LTBP3Q9NS15 1303 aa20.2■□□□□ 0.82
TUBB3-214ENST00000557490 PDE4DIPQ5VU43 2346 aa20.19■□□□□ 0.82
TUBB3-214ENST00000557490 POTEIP0CG38 1075 aa20.19■□□□□ 0.82
TUBB3-214ENST00000557490 POTEJP0CG39 1038 aa20.19■□□□□ 0.82
TUBB3-214ENST00000557490 VEGFBP49765 207 aa20.19■□□□□ 0.82
TUBB3-214ENST00000557490 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
TUBB3-214ENST00000557490 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
TUBB3-214ENST00000557490 ABCC4O15439 1325 aa20.19■□□□□ 0.82
TUBB3-214ENST00000557490 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
TUBB3-214ENST00000557490 BBOX1O75936 387 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 CT47B1P0C2W7 299 aaPredicted RBP20.18■□□□□ 0.82
TUBB3-214ENST00000557490 RGS19P49795 217 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 OLFM4Q6UX06 510 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 MRPL50Q8N5N7 158 aaKnown RBP20.18■□□□□ 0.82
TUBB3-214ENST00000557490 LINS1Q8NG48 757 aa20.18■□□□□ 0.82
TUBB3-214ENST00000557490 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 F6X3S4 739 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 PDE8AO60658 829 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 HSPA8P11142 646 aaKnown RBP20.17■□□□□ 0.82
TUBB3-214ENST00000557490 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.822e-6■■■■□ 22.8
TUBB3-214ENST00000557490 GRAPQ13588 217 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-214ENST00000557490 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 CDHR2Q9BYE9 1310 aa20.17■□□□□ 0.82
TUBB3-214ENST00000557490 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
TUBB3-214ENST00000557490 GCKRQ14397 625 aa20.16■□□□□ 0.82
TUBB3-214ENST00000557490 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
TUBB3-214ENST00000557490 ATP6V0A2Q9Y487 856 aa20.16■□□□□ 0.82
TUBB3-214ENST00000557490 CCDC152Q4G0S7 254 aa20.15■□□□□ 0.82
TUBB3-214ENST00000557490 PTPRCP08575 1304 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 CCDC85CA6NKD9 419 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 H7C1W4 665 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 BEND3Q5T5X7 828 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
TUBB3-214ENST00000557490 TNRC18O15417 2968 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-214ENST00000557490 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
TUBB3-214ENST00000557490 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
TUBB3-214ENST00000557490 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
TUBB3-214ENST00000557490 PSMD1Q99460 953 aa20.13■□□□□ 0.81
TUBB3-214ENST00000557490 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-214ENST00000557490 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
TUBB3-214ENST00000557490 LAMB2P55268 1798 aa20.11■□□□□ 0.81
TUBB3-214ENST00000557490 CTSWP56202 376 aa20.11■□□□□ 0.81
TUBB3-214ENST00000557490 CELF1Q92879 486 aaKnown RBP20.11■□□□□ 0.81
TUBB3-214ENST00000557490 CCDC85AQ96PX6 553 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-214ENST00000557490 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
TUBB3-214ENST00000557490 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
TUBB3-214ENST00000557490 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
TUBB3-214ENST00000557490 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
TUBB3-214ENST00000557490 RPS8P62241 208 aaKnown RBP20.1■□□□□ 0.81
TUBB3-214ENST00000557490 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
TUBB3-214ENST00000557490 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 CASP7P55210 303 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 DPP8Q6V1X1 898 aaPredicted RBP20.09■□□□□ 0.81
TUBB3-214ENST00000557490 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 MPNDQ8N594 471 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 SUPT20HQ8NEM7 779 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 PLA2G12BQ9BX93 195 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
TUBB3-214ENST00000557490 DDNO94850 711 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-214ENST00000557490 LDHDQ86WU2 507 aa20.08■□□□□ 0.81
TUBB3-214ENST00000557490 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
TUBB3-214ENST00000557490 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-214ENST00000557490 GRM8O00222 908 aa20.07■□□□□ 0.8
TUBB3-214ENST00000557490 RARSP54136 660 aaKnown RBP20.07■□□□□ 0.8
TUBB3-214ENST00000557490 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
TUBB3-214ENST00000557490 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
TUBB3-214ENST00000557490 CDC5LQ99459 802 aaKnown RBP20.07■□□□□ 0.8
TUBB3-214ENST00000557490 SCN4AP35499 1836 aa20.06■□□□□ 0.8
TUBB3-214ENST00000557490 ITGBL1O95965 494 aaPredicted RBP20.06■□□□□ 0.8
TUBB3-214ENST00000557490 BRPF1P55201 1214 aaPredicted RBP20.06■□□□□ 0.8
TUBB3-214ENST00000557490 LARGE2Q8N3Y3 721 aa20.06■□□□□ 0.8
TUBB3-214ENST00000557490 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms