RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	CNTNAP1	P78357	1384 aa		14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	HCLS1	P14317	486 aa	Predicted RBP	14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	SCNN1D	P51172	638 aa		14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	AIMP1	Q12904	312 aa	Known RBP	14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	MAP1S	Q66K74	1059 aa	Predicted RBP	14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	NLRP3	Q96P20	1036 aa		14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ATP6V0A2	Q9Y487	856 aa		14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ABCC4	O15439	1325 aa		14.64	□□□□□ -0.07
HNRNPC-231	ENST00000557336	EPS15	P42566	896 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	LMOD3	Q0VAK6	560 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	TCIRG1	Q13488	830 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	CNTROB	Q8N137	903 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	JDP2	Q8WYK2	163 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	RUNDC1	Q96C34	613 aa		14.63	□□□□□ -0.07
HNRNPC-231	ENST00000557336	FMR1	Q06787	632 aa	Known RBP eCLIP	14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	GRIPAP1	Q4V328	841 aa		14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	PNMA8A	Q86V59	439 aa	Predicted RBP	14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	LARGE2	Q8N3Y3	721 aa		14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ZNF428	Q96B54	188 aa		14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	RTFDC1	Q9BY42	306 aa	Predicted RBP	14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	CHPF2	Q9P2E5	772 aa		14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	GJA3	Q9Y6H8	435 aa		14.62	□□□□□ -0.07
HNRNPC-231	ENST00000557336	TMEM88B	A6NKF7	163 aa		14.61	□□□□□ -0.07
HNRNPC-231	ENST00000557336	VEGFB	P49765	207 aa		14.61	□□□□□ -0.07
HNRNPC-231	ENST00000557336	AOC3	Q16853	763 aa		14.61	□□□□□ -0.07
HNRNPC-231	ENST00000557336	BBOX1	O75936	387 aa		14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ZNF853	P0CG23	659 aa		14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	EIF6	P56537	245 aa	Known RBP	14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ISCA1	Q9BUE6	129 aa		14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	TRMT112	Q9UI30	125 aa	Known RBP	14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	LAS1L	Q9Y4W2	734 aa	Known RBP	14.6	□□□□□ -0.07
HNRNPC-231	ENST00000557336	COL4A1	P02462	1669 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	FOXN1	O15353	648 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	PPIP5K2	O43314	1243 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	CXCL9	Q07325	125 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	HSP90AB3P	Q58FF7	597 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	SP8	Q8IXZ3	490 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	TNS4	Q8IZW8	715 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	SP7	Q8TDD2	431 aa	Predicted RBP	14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	SPOCK2	Q92563	424 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	LAMB2	P55268	1798 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	SH3TC1	Q8TE82	1336 aa		14.59	□□□□□ -0.07
HNRNPC-231	ENST00000557336	ANKRD36C	Q5JPF3	1778 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	RASSF10	A6NK89	507 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	HOXB7	P09629	217 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	HDGFL1	Q5TGJ6	251 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	NIM1K	Q8IY84	436 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	PLBD2	Q8NHP8	589 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	CFAP44	Q96MT7	982 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	PHF12	Q96QT6	1004 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	VPS33B	Q9H267	617 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	MBIP	Q9NS73	344 aa		14.58	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DUOX1	Q9NRD9	1551 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	KIAA2012	Q0VF49	1180 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	GRAP	Q13588	217 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	WDR43	Q15061	677 aa	Known RBP eCLIP	14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DUSP27	Q5VZP5	1158 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	CST9	Q5W186	159 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	ANKRD13D	Q6ZTN6	518 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	GRAPL	Q8TC17	118 aa	Predicted RBP	14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	FAM89A	Q96GI7	184 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	GPRC5D	Q9NZD1	345 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	ZNRF3	Q9ULT6	936 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	TAF1	P21675	1872 aa		14.57	□□□□□ -0.08
HNRNPC-231	ENST00000557336	YDJC	A8MPS7	323 aa		14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	ATP5J2-PTCD1	G3V325	749 aa		14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	TRAF5	O00463	557 aa		14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DPP8	Q6V1X1	898 aa	Predicted RBP	14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	USP50	Q70EL3	339 aa	Predicted RBP	14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	MPND	Q8N594	471 aa		14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	WBP1L	Q9NX94	342 aa		14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DBF4	Q9UBU7	674 aa	Predicted RBP	14.56	□□□□□ -0.08
HNRNPC-231	ENST00000557336	APAF1	O14727	1248 aa		14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	GMPS	P49915	693 aa	Predicted RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	HIRA	P54198	1017 aa	Predicted RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	TRIM28	Q13263	835 aa	Known RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	SF3B3	Q15393	1217 aa	Known RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DDX46	Q7L014	1031 aa	Known RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	CELF1	Q92879	486 aa	Known RBP	14.55	□□□□□ -0.08
HNRNPC-231	ENST00000557336	SHTN1	A0MZ66	631 aa		14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	LMOD1	P29536	600 aa	Predicted RBP	14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DEFB115	Q30KQ5	88 aa		14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	SUPT20H	Q8NEM7	779 aa		14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	PHAX	Q9H814	394 aa	Known RBP	14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	HYPK	Q9NX55	129 aa		14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	PGAP2	Q9UHJ9	254 aa		14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	DDX60	Q8IY21	1712 aa	Known RBP	14.54	□□□□□ -0.08
HNRNPC-231	ENST00000557336	RAD17	O75943	681 aa		14.53	□□□□□ -0.08
HNRNPC-231	ENST00000557336	RTL5	Q5HYW3	569 aa	Predicted RBP	14.53	□□□□□ -0.08
HNRNPC-231	ENST00000557336	ZNF579	Q8NAF0	562 aa	Known RBP	14.53	□□□□□ -0.08
HNRNPC-231	ENST00000557336	C8orf58	Q8NAV2	365 aa		14.53	□□□□□ -0.08
HNRNPC-231	ENST00000557336	ADARB2	Q9NS39	739 aa	Known RBP	14.53	□□□□□ -0.08
HNRNPC-231	ENST00000557336	LRRC37A	A6NMS7	1700 aa		14.52	□□□□□ -0.08
HNRNPC-231	ENST00000557336	WDR33	Q9C0J8	1336 aa	Known RBP	14.52	□□□□□ -0.08
HNRNPC-231	ENST00000557336	CIAPIN1	Q6FI81	312 aa		14.52	□□□□□ -0.09
HNRNPC-231	ENST00000557336	POLL	Q9UGP5	575 aa		14.52	□□□□□ -0.09
HNRNPC-231	ENST00000557336	ELL2	O00472	640 aa	Predicted RBP	14.51	□□□□□ -0.09
HNRNPC-231	ENST00000557336	GPSM2	P81274	684 aa		14.51	□□□□□ -0.09
HNRNPC-231	ENST00000557336	CCDC184	Q52MB2	194 aa		14.51	□□□□□ -0.09

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