RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 GRM1Q13255 1194 aa13.43□□□□□ -0.26
RDH11-210ENST00000557331 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
RDH11-210ENST00000557331 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
RDH11-210ENST00000557331 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
RDH11-210ENST00000557331 ABCC4O15439 1325 aa13.41□□□□□ -0.26
RDH11-210ENST00000557331 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
RDH11-210ENST00000557331 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
RDH11-210ENST00000557331 GRAPQ13588 217 aa13.41□□□□□ -0.26
RDH11-210ENST00000557331 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
RDH11-210ENST00000557331 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
RDH11-210ENST00000557331 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
RDH11-210ENST00000557331 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
RDH11-210ENST00000557331 SAGE1Q9NXZ1 904 aa13.41□□□□□ -0.26
RDH11-210ENST00000557331 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
RDH11-210ENST00000557331 COL4A5P29400 1685 aa13.4□□□□□ -0.26
RDH11-210ENST00000557331 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
RDH11-210ENST00000557331 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
RDH11-210ENST00000557331 GLIS2Q9BZE0 524 aaPredicted RBP13.4□□□□□ -0.26
RDH11-210ENST00000557331 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
RDH11-210ENST00000557331 AOC2O75106 756 aa13.39□□□□□ -0.27
RDH11-210ENST00000557331 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
RDH11-210ENST00000557331 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
RDH11-210ENST00000557331 MCOLN1Q9GZU1 580 aa13.39□□□□□ -0.27
RDH11-210ENST00000557331 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
RDH11-210ENST00000557331 RAD17O75943 681 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
RDH11-210ENST00000557331 HUNKP57058 714 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
RDH11-210ENST00000557331 PDIA6Q15084 440 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 EYA3Q99504 573 aa13.38□□□□□ -0.27
RDH11-210ENST00000557331 DGKZQ13574 1117 aa13.37□□□□□ -0.27
RDH11-210ENST00000557331 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
RDH11-210ENST00000557331 DCPSQ96C86 337 aaKnown RBP13.37□□□□□ -0.27
RDH11-210ENST00000557331 ZNF408Q9H9D4 720 aa13.37□□□□□ -0.27
RDH11-210ENST00000557331 HIRAP54198 1017 aaPredicted RBP13.36□□□□□ -0.27
RDH11-210ENST00000557331 RGMBQ6NW40 437 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 KRT26Q7Z3Y9 468 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 DLG5Q8TDM6 1919 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
RDH11-210ENST00000557331 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
RDH11-210ENST00000557331 HOXB7P09629 217 aa13.35□□□□□ -0.27
RDH11-210ENST00000557331 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
RDH11-210ENST00000557331 RIPK4P57078 832 aa13.35□□□□□ -0.27
RDH11-210ENST00000557331 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
RDH11-210ENST00000557331 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
RDH11-210ENST00000557331 GBA2Q9HCG7 927 aaPredicted RBP13.35□□□□□ -0.27
RDH11-210ENST00000557331 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
RDH11-210ENST00000557331 FKBP1BP68106 108 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 TRPM4Q8TD43 1214 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
RDH11-210ENST00000557331 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
RDH11-210ENST00000557331 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
RDH11-210ENST00000557331 YDJCA8MPS7 323 aa13.33□□□□□ -0.28
RDH11-210ENST00000557331 C6orf229H3BNL8 230 aa13.33□□□□□ -0.28
RDH11-210ENST00000557331 PSMD14O00487 310 aa13.33□□□□□ -0.28
RDH11-210ENST00000557331 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
RDH11-210ENST00000557331 AIMP1Q12904 312 aaKnown RBP13.33□□□□□ -0.28
RDH11-210ENST00000557331 TRIM28Q13263 835 aaKnown RBP13.33□□□□□ -0.28
RDH11-210ENST00000557331 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
RDH11-210ENST00000557331 MMP14P50281 582 aa13.32□□□□□ -0.28
RDH11-210ENST00000557331 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
RDH11-210ENST00000557331 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
RDH11-210ENST00000557331 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
RDH11-210ENST00000557331 G3V3G9 751 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 CHL1O00533 1208 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 VIL1P09327 827 aaKnown RBP13.31□□□□□ -0.28
RDH11-210ENST00000557331 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
RDH11-210ENST00000557331 RALBP1Q15311 655 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
RDH11-210ENST00000557331 FAM155AB1AL88 458 aaPredicted RBP13.3□□□□□ -0.28
RDH11-210ENST00000557331 ECE2O60344 883 aa13.3□□□□□ -0.28
RDH11-210ENST00000557331 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
RDH11-210ENST00000557331 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
RDH11-210ENST00000557331 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
RDH11-210ENST00000557331 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
RDH11-210ENST00000557331 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
RDH11-210ENST00000557331 ANXA1P04083 346 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 DBNDD1Q9H9R9 158 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 RNF186Q9NXI6 227 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 POLLQ9UGP5 575 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 ZNF609O15014 1411 aa13.29□□□□□ -0.28
RDH11-210ENST00000557331 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 TRPA1O75762 1119 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 SLC10A3P09131 477 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms