RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 CFAP58Q5T655 872 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 GBP1P32455 592 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 KIF5AQ12840 1032 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
SPTB-208ENST00000556626 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 JAKMIP2Q96AA8 810 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
SPTB-208ENST00000556626 RAB3IL1Q8TBN0 382 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
SPTB-208ENST00000556626 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
SPTB-208ENST00000556626 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
SPTB-208ENST00000556626 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 KRT13P13646 458 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 ARFGAP2Q8N6H7 521 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 METTL24Q5JXM2 366 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 TRIM27P14373 513 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
SPTB-208ENST00000556626 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 UBA7P41226 1012 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 NLRP5P59047 1200 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 CCDC186Q7Z3E2 898 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
SPTB-208ENST00000556626 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
SPTB-208ENST00000556626 TERF1P54274 439 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 CUL5Q93034 780 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 SELENOSQ9BQE4 189 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
SPTB-208ENST00000556626 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 STAT6P42226 847 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 CCDC184Q52MB2 194 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 EHMT1Q9H9B1 1298 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 METAP2P50579 478 aaKnown RBP eCLIP12.34□□□□□ -0.433e-7■■■■□ 23.7
SPTB-208ENST00000556626 TYRO3Q06418 890 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 ZSCAN29Q8IWY8 852 aaPredicted RBP12.34□□□□□ -0.43
SPTB-208ENST00000556626 CACNA2D3Q8IZS8 1091 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
SPTB-208ENST00000556626 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 LMBR1Q8WVP7 490 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 ATP5DP30049 168 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 PSMC4P43686 418 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 SPAG1Q07617 926 aa12.34□□□□□ -0.43
SPTB-208ENST00000556626 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.43
SPTB-208ENST00000556626 BMP15O95972 392 aa12.33□□□□□ -0.43
SPTB-208ENST00000556626 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 LMNTD2Q8IXW0 634 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 AOPEPQ8N6M6 819 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 DZIP1Q86YF9 867 aaKnown RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 TRIM7Q9C029 511 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 EPRSP07814 1512 aaKnown RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 PHACTR2O75167 634 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPTB-208ENST00000556626 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 SPTY2D1Q68D10 685 aaPredicted RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 SNX21Q969T3 373 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 IFIT1P09914 478 aaKnown RBP12.33□□□□□ -0.44
SPTB-208ENST00000556626 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 NUCB1Q02818 461 aa12.33□□□□□ -0.44
SPTB-208ENST00000556626 PABPN1LA6NDY0 278 aaKnown RBP12.32□□□□□ -0.44
SPTB-208ENST00000556626 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
SPTB-208ENST00000556626 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
SPTB-208ENST00000556626 ARHGAP25P42331 645 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 CCDC82Q8N4S0 544 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 CAPZA3Q96KX2 299 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 PCK1P35558 622 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 GSTA5Q7RTV2 222 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 PRC1O43663 620 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 ALDH3A1P30838 453 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
SPTB-208ENST00000556626 PTGS1P23219 599 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 LRRC45Q96CN5 670 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
SPTB-208ENST00000556626 ATP2A2P16615 1042 aaKnown RBP12.32□□□□□ -0.44
SPTB-208ENST00000556626 CIB2O75838 187 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 PPFIBP2Q8ND30 876 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 SH2D4BQ5SQS7 431 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms