RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 HYPKQ9NX55 129 aa24.47■■□□□ 1.51
CDKN3-209ENST00000556102 ZNRF3Q9ULT6 936 aa24.46■■□□□ 1.51
CDKN3-209ENST00000556102 LRRC37AA6NMS7 1700 aa24.46■■□□□ 1.51
CDKN3-209ENST00000556102 ZNF853P0CG23 659 aa24.45■■□□□ 1.5
CDKN3-209ENST00000556102 USP50Q70EL3 339 aaPredicted RBP24.45■■□□□ 1.5
CDKN3-209ENST00000556102 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
CDKN3-209ENST00000556102 VEGFBP49765 207 aa24.44■■□□□ 1.5
CDKN3-209ENST00000556102 KIAA2012Q0VF49 1180 aa24.44■■□□□ 1.5
CDKN3-209ENST00000556102 ZNF428Q96B54 188 aa24.44■■□□□ 1.5
CDKN3-209ENST00000556102 ATP5J2-PTCD1G3V325 749 aa24.43■■□□□ 1.5
CDKN3-209ENST00000556102 APAF1O14727 1248 aa24.43■■□□□ 1.5
CDKN3-209ENST00000556102 CXCL9Q07325 125 aa24.43■■□□□ 1.5
CDKN3-209ENST00000556102 FAM89AQ96GI7 184 aa24.43■■□□□ 1.5
CDKN3-209ENST00000556102 IFT57Q9NWB7 429 aa24.43■■□□□ 1.5
CDKN3-209ENST00000556102 DUOX1Q9NRD9 1551 aa24.42■■□□□ 1.5
CDKN3-209ENST00000556102 RASSF10A6NK89 507 aa24.42■■□□□ 1.5
CDKN3-209ENST00000556102 GNAI1P63096 354 aa24.42■■□□□ 1.5
CDKN3-209ENST00000556102 CALD1Q05682 793 aaKnown RBP24.42■■□□□ 1.5
CDKN3-209ENST00000556102 GPRC5DQ9NZD1 345 aa24.42■■□□□ 1.5
CDKN3-209ENST00000556102 TRPM7Q96QT4 1865 aa24.42■■□□□ 1.5
CDKN3-209ENST00000556102 TRIM28Q13263 835 aaKnown RBP24.41■■□□□ 1.5
CDKN3-209ENST00000556102 SF3B3Q15393 1217 aaKnown RBP24.41■■□□□ 1.5
CDKN3-209ENST00000556102 ADARB2Q9NS39 739 aaKnown RBP24.41■■□□□ 1.5
CDKN3-209ENST00000556102 DEFB115Q30KQ5 88 aa24.4■■□□□ 1.5
CDKN3-209ENST00000556102 CIAPIN1Q6FI81 312 aa24.4■■□□□ 1.5
CDKN3-209ENST00000556102 CDHR2Q9BYE9 1310 aa24.39■■□□□ 1.5
CDKN3-209ENST00000556102 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
CDKN3-209ENST00000556102 FOXN1O15353 648 aa24.38■■□□□ 1.49
CDKN3-209ENST00000556102 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
CDKN3-209ENST00000556102 TNIP1Q15025 636 aa24.38■■□□□ 1.49
CDKN3-209ENST00000556102 RIC3Q7Z5B4 369 aa24.38■■□□□ 1.49
CDKN3-209ENST00000556102 CELF1Q92879 486 aaKnown RBP24.38■■□□□ 1.49
CDKN3-209ENST00000556102 ABT1Q9ULW3 272 aaKnown RBP24.38■■□□□ 1.49
CDKN3-209ENST00000556102 IRS4O14654 1257 aaPredicted RBP24.37■■□□□ 1.49
CDKN3-209ENST00000556102 ELL2O00472 640 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-209ENST00000556102 RAD17O75943 681 aa24.36■■□□□ 1.49
CDKN3-209ENST00000556102 FMR1Q06787 632 aaKnown RBP eCLIP24.36■■□□□ 1.49
CDKN3-209ENST00000556102 RTL5Q5HYW3 569 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-209ENST00000556102 AIDAQ96BJ3 306 aa24.36■■□□□ 1.49
CDKN3-209ENST00000556102 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
CDKN3-209ENST00000556102 PHAXQ9H814 394 aaKnown RBP24.36■■□□□ 1.49
CDKN3-209ENST00000556102 COL4A1P02462 1669 aa24.35■■□□□ 1.49
CDKN3-209ENST00000556102 YDJCA8MPS7 323 aa24.34■■□□□ 1.49
CDKN3-209ENST00000556102 TRAF5O00463 557 aa24.34■■□□□ 1.49
CDKN3-209ENST00000556102 CAPN15O75808 1086 aa24.34■■□□□ 1.49
CDKN3-209ENST00000556102 ZBTB38Q8NAP3 1195 aaPredicted RBP24.34■■□□□ 1.49
CDKN3-209ENST00000556102 WBP1LQ9NX94 342 aa24.34■■□□□ 1.49
CDKN3-209ENST00000556102 NSFL1CQ9UNZ2 370 aaKnown RBP24.34■■□□□ 1.49
CDKN3-209ENST00000556102 WDR33Q9C0J8 1336 aaKnown RBP24.34■■□□□ 1.49
CDKN3-209ENST00000556102 HSP90B1P14625 803 aaKnown RBP24.33■■□□□ 1.49
CDKN3-209ENST00000556102 CTCFP49711 727 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-209ENST00000556102 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
CDKN3-209ENST00000556102 C8orf58Q8NAV2 365 aa24.33■■□□□ 1.49
CDKN3-209ENST00000556102 CHMP4AQ9BY43 222 aa24.33■■□□□ 1.49
CDKN3-209ENST00000556102 PRDM10Q9NQV6 1147 aa24.33■■□□□ 1.49
CDKN3-209ENST00000556102 MYD88Q99836 296 aa24.32■■□□□ 1.48
CDKN3-209ENST00000556102 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
CDKN3-209ENST00000556102 RPS8P62241 208 aaKnown RBP24.31■■□□□ 1.48
CDKN3-209ENST00000556102 GPSM2P81274 684 aa24.31■■□□□ 1.48
CDKN3-209ENST00000556102 CST9Q5W186 159 aa24.31■■□□□ 1.48
CDKN3-209ENST00000556102 CCDC191Q8NCU4 936 aa24.31■■□□□ 1.48
CDKN3-209ENST00000556102 PGAP2Q9UHJ9 254 aa24.31■■□□□ 1.48
CDKN3-209ENST00000556102 C6orf229H3BNL8 230 aa24.3■■□□□ 1.48
CDKN3-209ENST00000556102 CCDC30Q5VVM6 783 aa24.3■■□□□ 1.48
CDKN3-209ENST00000556102 ZC3H15Q8WU90 426 aaKnown RBP24.3■■□□□ 1.48
CDKN3-209ENST00000556102 POLLQ9UGP5 575 aa24.3■■□□□ 1.48
CDKN3-209ENST00000556102 CNOT7Q9UIV1 285 aaKnown RBP24.3■■□□□ 1.48
CDKN3-209ENST00000556102 DDX58O95786 925 aaKnown RBP24.29■■□□□ 1.48
CDKN3-209ENST00000556102 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-209ENST00000556102 ECE1P42892 770 aa24.29■■□□□ 1.48
CDKN3-209ENST00000556102 HIRAP54198 1017 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-209ENST00000556102 MAP2K1Q02750 393 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-209ENST00000556102 TRPM4Q8TD43 1214 aa24.29■■□□□ 1.48
CDKN3-209ENST00000556102 EYA3Q99504 573 aa24.29■■□□□ 1.48
CDKN3-209ENST00000556102 DBNDD1Q9H9R9 158 aa24.29■■□□□ 1.48
CDKN3-209ENST00000556102 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
CDKN3-209ENST00000556102 H7C1D1 291 aa24.28■■□□□ 1.48
CDKN3-209ENST00000556102 RIMBP2O15034 1052 aa24.28■■□□□ 1.48
CDKN3-209ENST00000556102 DPF2Q92785 391 aa24.28■■□□□ 1.48
CDKN3-209ENST00000556102 CAPNS2Q96L46 248 aa24.28■■□□□ 1.48
CDKN3-209ENST00000556102 METTL22Q9BUU2 404 aaPredicted RBP24.28■■□□□ 1.48
CDKN3-209ENST00000556102 GLIS2Q9BZE0 524 aaPredicted RBP24.28■■□□□ 1.48
CDKN3-209ENST00000556102 CWC25Q9NXE8 425 aaPredicted RBP24.28■■□□□ 1.48
CDKN3-209ENST00000556102 PSMD14O00487 310 aa24.27■■□□□ 1.48
CDKN3-209ENST00000556102 CCDC152Q4G0S7 254 aa24.27■■□□□ 1.48
CDKN3-209ENST00000556102 PAXIP1Q6ZW49 1069 aaPredicted RBP24.27■■□□□ 1.48
CDKN3-209ENST00000556102 MICALL2Q8IY33 904 aa24.27■■□□□ 1.48
CDKN3-209ENST00000556102 TBC1D16Q8TBP0 767 aa24.27■■□□□ 1.48
CDKN3-209ENST00000556102 SEC31BQ9NQW1 1179 aa24.27■■□□□ 1.48
CDKN3-209ENST00000556102 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 ECE2O60344 883 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 PDE8AO60658 829 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 CELF2O95319 508 aaKnown RBP24.26■■□□□ 1.47
CDKN3-209ENST00000556102 CYP4F22Q6NT55 531 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 TSPYL6Q8N831 410 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 PODXL2Q9NZ53 605 aa24.26■■□□□ 1.47
CDKN3-209ENST00000556102 ZBTB12Q9Y330 459 aaPredicted RBP24.26■■□□□ 1.47
CDKN3-209ENST00000556102 LBX1P52954 281 aa24.25■■□□□ 1.47
CDKN3-209ENST00000556102 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
CDKN3-209ENST00000556102 CDC37L1Q7L3B6 337 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms