RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 POTEJP0CG39 1038 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
PCNX4-209ENST00000555569 DPP8Q6V1X1 898 aaPredicted RBP17.78■□□□□ 0.44
PCNX4-209ENST00000555569 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
PCNX4-209ENST00000555569 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 CACNA1FO60840 1977 aa17.77■□□□□ 0.44
PCNX4-209ENST00000555569 AOC3Q16853 763 aa17.77■□□□□ 0.44
PCNX4-209ENST00000555569 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
PCNX4-209ENST00000555569 MPNDQ8N594 471 aa17.77■□□□□ 0.44
PCNX4-209ENST00000555569 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
PCNX4-209ENST00000555569 METTL22Q9BUU2 404 aaPredicted RBP17.77■□□□□ 0.44
PCNX4-209ENST00000555569 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
PCNX4-209ENST00000555569 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
PCNX4-209ENST00000555569 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
PCNX4-209ENST00000555569 KLRG1Q96E93 195 aa17.76■□□□□ 0.43
PCNX4-209ENST00000555569 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
PCNX4-209ENST00000555569 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
PCNX4-209ENST00000555569 PCCAP05165 728 aaPredicted RBP17.75■□□□□ 0.43
PCNX4-209ENST00000555569 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
PCNX4-209ENST00000555569 EPHX2P34913 555 aa17.75■□□□□ 0.43
PCNX4-209ENST00000555569 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
PCNX4-209ENST00000555569 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
PCNX4-209ENST00000555569 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
PCNX4-209ENST00000555569 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
PCNX4-209ENST00000555569 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
PCNX4-209ENST00000555569 FANCIQ9NVI1 1328 aa17.74■□□□□ 0.43
PCNX4-209ENST00000555569 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
PCNX4-209ENST00000555569 COL4A1P02462 1669 aa17.74■□□□□ 0.43
PCNX4-209ENST00000555569 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
PCNX4-209ENST00000555569 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
PCNX4-209ENST00000555569 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
PCNX4-209ENST00000555569 KIAA2012Q0VF49 1180 aa17.73■□□□□ 0.43
PCNX4-209ENST00000555569 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
PCNX4-209ENST00000555569 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
PCNX4-209ENST00000555569 DUOX1Q9NRD9 1551 aa17.73■□□□□ 0.43
PCNX4-209ENST00000555569 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
PCNX4-209ENST00000555569 G2E3Q7L622 706 aa17.72■□□□□ 0.43
PCNX4-209ENST00000555569 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-209ENST00000555569 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
PCNX4-209ENST00000555569 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
PCNX4-209ENST00000555569 MYH3P11055 1940 aa17.71■□□□□ 0.43
PCNX4-209ENST00000555569 PDE8AO60658 829 aa17.71■□□□□ 0.43
PCNX4-209ENST00000555569 IGKV5-2P06315 115 aa17.71■□□□□ 0.43
PCNX4-209ENST00000555569 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.43
PCNX4-209ENST00000555569 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
PCNX4-209ENST00000555569 NEXNQ0ZGT2 675 aa17.71■□□□□ 0.43
PCNX4-209ENST00000555569 CCDC152Q4G0S7 254 aa17.71■□□□□ 0.43
PCNX4-209ENST00000555569 VAMP4O75379 141 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 SCNN1DP51172 638 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 CXCL9Q07325 125 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
PCNX4-209ENST00000555569 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
PCNX4-209ENST00000555569 EPS15P42566 896 aa17.69■□□□□ 0.42
PCNX4-209ENST00000555569 GPSM2P81274 684 aa17.69■□□□□ 0.42
PCNX4-209ENST00000555569 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
PCNX4-209ENST00000555569 FLIIQ13045 1269 aa17.69■□□□□ 0.42
PCNX4-209ENST00000555569 CREBZFQ9NS37 354 aa17.69■□□□□ 0.42
PCNX4-209ENST00000555569 CIAPIN1Q6FI81 312 aa17.68■□□□□ 0.42
PCNX4-209ENST00000555569 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
PCNX4-209ENST00000555569 NEURL1BA8MQ27 555 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 ITGBL1O95965 494 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-209ENST00000555569 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-209ENST00000555569 TNIP1Q15025 636 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 CWF19L2Q2TBE0 894 aaKnown RBP17.67■□□□□ 0.42
PCNX4-209ENST00000555569 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-209ENST00000555569 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
PCNX4-209ENST00000555569 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 RAD17O75943 681 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 CTSWP56202 376 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 MAP1SQ66K74 1059 aaPredicted RBP17.66■□□□□ 0.42
PCNX4-209ENST00000555569 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
PCNX4-209ENST00000555569 CNTROBQ8N137 903 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 DNAAF4Q8WXU2 420 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 EYA3Q99504 573 aa17.66■□□□□ 0.42
PCNX4-209ENST00000555569 RIMBP2O15034 1052 aa17.65■□□□□ 0.42
PCNX4-209ENST00000555569 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
PCNX4-209ENST00000555569 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
PCNX4-209ENST00000555569 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
PCNX4-209ENST00000555569 SPEF2Q9C093 1822 aa17.64■□□□□ 0.41
PCNX4-209ENST00000555569 H7C1W4 665 aa17.64■□□□□ 0.41
PCNX4-209ENST00000555569 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.41
PCNX4-209ENST00000555569 DBNDD1Q9H9R9 158 aa17.64■□□□□ 0.41
PCNX4-209ENST00000555569 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
PCNX4-209ENST00000555569 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
PCNX4-209ENST00000555569 TMEM88BA6NKF7 163 aa17.63■□□□□ 0.41
PCNX4-209ENST00000555569 GCKRQ14397 625 aa17.63■□□□□ 0.41
PCNX4-209ENST00000555569 UBE3BQ7Z3V4 1068 aa17.63■□□□□ 0.41
PCNX4-209ENST00000555569 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms